FMO08062.5prime Sequence
542 bp (542 high quality bases) assembled on 2009-09-01
> FMO08062.5prime
CAGTCGACATGGGACGCAAAGGCCACAAGACTAGAAGGAAAGTTAAAGTC
CACTCGAAGGTCCATCCTCCTCAGAAAATTAAAGCGAAGCTGCCGAAAAG
AGATAAACGTAGCACACTTCGTCCCAAGATTAATAATTCGAAGGTTTTTC
ACGTGAACTGCTGCAAGTACAAGATCCGTTCGAGACCCATGAGGCGCAAT
CAGTGCAACCTGGCCACCCAGTGCCCCTCCCACACGGTCGCCATCGCCCC
GTCTGTGCCGCTCCTGCATCATCCTGTCCGGCGGAAGGTGGTCCATATGC
CGGAAACCGTGGTCATGCACATGCGGAATATGGAGGACGCCCGCCGAGTG
GCGGTTAAGCACAGAAGAACCCTTATTCAAACCCATGTTCCTTCGCCGGA
TGTGGATGATGACGAAGATACACACCAAATCGATCGGAGGTCAAGGCAAG
CCTATAGGATGGGTCAAATGAGACCCTTATCCAGCGACGTGGATGTGGAT
GACATGGATGTGGACCCGTTTCAGGCAAGCTTTCTAGACCAT
FMO08062.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13541-RB | 1528 | CG13541-RB | 78..593 | 9..524 | 2580 | 100 | Plus |
| CG13541-RA | 986 | CG13541-RA | 78..593 | 9..524 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23284304..23284819 | 9..524 | 2580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:02:51 has no hits.
FMO08062.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:17 Download gff for
FMO08062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13541-RA | 18..540 | 1..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:00 Download gff for
FMO08062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13541-RA | 71..593 | 1..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:12 Download gff for
FMO08062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13541-RA | 71..593 | 1..524 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:12 Download gff for
FMO08062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23284297..23284819 | 1..524 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:00 Download gff for
FMO08062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19171820..19172342 | 1..524 | 99 | | Plus |
