Clone FMO08064 Report

Search the DGRC for FMO08064

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:80
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30324-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08064.5prime Sequence

518 bp (518 high quality bases) assembled on 2009-09-01

> FMO08064.5prime
CAGTCGACATGTTTTCCGATCCCGCCCAGGAGTCGGTTGCCACGCAGACG
GAGGCACAACCGGTTCCGTCGCCCATCTGCACCCCACTGCTGATGGTGGA
CGAGGATGGACGAAAGCGGTACTGCTACCATGGTGGAAAATGCAAGTGTG
CCACTTGCGCACAAATTCGTGCAGAGCAGGCAGTGAAACTCGACCAGGAG
CTGCTGTCCTACATACCGCACTCGAAGCTCCACCTGGAAGTTCCAATCCG
AATGGCCAAGCCGAAGCAGTATCGCCTGGAAGCTCGACGGGCTACTCCCG
AACTGGCAAAATTTCTGCGGGAGGATCACGAGAGGCTGAGGGCGGAGTAT
CCATCGTACTATCTCCCGGATCGATACTTTGGTAAGAAATTCTACGAGTT
GCCAGGACCGCAGCACAAGGAGACCCAGACGGACATTCCGATTGGGCGTT
ACGGCATCGATGGTTGTCCCTGTACCAATAAATCGCTCTGCTATGACTTG
GCAAGCTTTCTAGACCAT

FMO08064.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG30324-RA 648 CG30324-RA 94..585 9..500 2460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16287649..16288140 500..9 2460 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:29:08 has no hits.

FMO08064.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:15 Download gff for FMO08064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 85..588 1..504 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:32 Download gff for FMO08064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 85..588 1..504 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:03 Download gff for FMO08064.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 85..588 1..504 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:03 Download gff for FMO08064.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 16287646..16288144 1..504 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:32 Download gff for FMO08064.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12175151..12175649 1..504 98   Minus