FMO08068.5prime Sequence
1037 bp (1031 high quality bases) assembled on 2009-09-01
> FMO08068.5prime
CAGTCGACATGCAGAGGATAATCGCTTTGGTGGCCATCATGGCGTGTGGA
CTATCGTTCGTGGCAGCTCAGTCATGTCAGACTTGTCTGGAGCAAAACGA
TGTGTACTGCGTTGATCAGAACAGCTATCAGAATTGCATGAAAAATGGTC
CAGTTGGAGATATTATCGAATGTCCTTCGGGCACCGTTTGCTCCAATTCT
GATAGCGTTTGTGCTCTGATCTCCGAGGTAAATTCGACCATATTGGACGT
GTGTGGAGGCTCTGGCGGAAATGGAGCTCAGTGCGAAGTGTGTTCCTCAG
GCGCCAAATACGCCTGTGTCAGCAGCACCCAGTATGCCCGCTGCTCCTCC
GCCGGCGATGTGCTGACCAGCAGTGTGTACAATTGCGGCACAGATGAGAT
TTGTATCATAGATGCTCTGTCGACGTATCAAACCGTCTGTGTACCGTCTT
GTGCCTCCGAATTTCTTGGATTGGATGCCACCTGTAGCAACAGTATTTAT
CAGCCAACCACAACAACTACAGTGGCTCCAACGACAACTCCTAGTGCTGC
GCAGAAAGAGGATTTGTGCAATGCTGGCGAGCCTAGTACCAATCCTAGTT
ACTTCTTTACCAGAATAACCGATGACTCCACGTGCAACAGCTACCTGTAC
TGCCAGAAATCTGGAACCACCTGGGTTGCCCTCTATATGACTTGCGGCGC
CTCCACGCCGTTCTTTGATTCAACCACCAGCTCATGTGTGACAACCAGGC
CGACCAGCTGCTCGGATACAACGACTCAGTCGCCCTCTGATTCTTCATCG
ACTGCTTCTTCAACTGAGTCCTCCTCCGAGTCTTCATCAACGACTGCTTC
ATCCACAGCTTCCTCATCAACGGAATCTACACCAACGACTGCGTCCTCGT
CGGCTTCTTCATCTACGGAATCTCCACCGAGTCTTCTTCACGACTGCTTC
ACCACGCAGTCTTCTTCTACGGAATCATCCACACAGTCTACCTCACAACT
CTACGACTACTCTACTCTGCAAGCTTTCTAGACATCG
FMO08068.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-RB | 1149 | CG13075-RB | 42..1058 | 7..1017 | 4935 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16084615..16085148 | 465..995 | 2520 | 99.4 | Plus |
| 3L | 28110227 | 3L | 16084238..16084560 | 142..464 | 1615 | 100 | Plus |
| 3L | 28110227 | 3L | 16084034..16084168 | 7..141 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:26 has no hits.
FMO08068.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:11 Download gff for
FMO08068.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RA | 1..1020 | 9..1022 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:14 Download gff for
FMO08068.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 37..1065 | 1..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:40 Download gff for
FMO08068.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 37..1065 | 1..1024 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:40 Download gff for
FMO08068.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16084029..16084168 | 1..141 | 97 | -> | Plus |
| 3L | 16084238..16084560 | 142..464 | 100 | -> | Plus |
| 3L | 16084615..16085180 | 465..1024 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:14 Download gff for
FMO08068.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16077129..16077268 | 1..141 | 97 | -> | Plus |
| arm_3L | 16077338..16077660 | 142..464 | 100 | -> | Plus |
| arm_3L | 16077715..16078280 | 465..1024 | 98 | | Plus |
