FMO08070.5prime Sequence
297 bp (297 high quality bases) assembled on 2009-09-01
> FMO08070.5prime
CAGTCGACATGTACCTACTACCTGGTAGTCTACTCCTGCTGATCTTTAGC
TTTAGCCCGAGGTTAAGTTGCCTGCAGTTGAGCAAGTGCAATAATACTGA
GGTGACCTTAATACGGAAGACGGAGCTCTTGACGTCACTCACATTGAGCA
ACTGCACGCTGCCGCATGTGGAAAATGGATTTTTCGTACGGTTTGATCAT
CTGCTTCATTTAGAACTGCAGCACAGTGGACTGAGTGATTTAGATGATTT
TTCACTGAATGGCTTGACAAAGTTACAATACCTTTCCCTGTCCCACA
FMO08070.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18095-RB | 1838 | CG18095-RB | 6..294 | 9..297 | 1445 | 100 | Plus |
| CG18095-RC | 1677 | CG18095-RC | 6..294 | 9..297 | 1445 | 100 | Plus |
| CG18095-RA | 2036 | CG18095-RA | 6..294 | 9..297 | 1445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14031246..14031534 | 297..9 | 1445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:54:44 has no hits.
FMO08070.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:19 Download gff for
FMO08070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18095-RA | 1..288 | 9..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:00 Download gff for
FMO08070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18095-RA | 2..293 | 5..296 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:10 Download gff for
FMO08070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18095-RA | 2..293 | 5..296 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:10 Download gff for
FMO08070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14031247..14031538 | 1..296 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:00 Download gff for
FMO08070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14031247..14031538 | 1..296 | 98 | | Minus |
