FMO08072.5prime Sequence
911 bp (911 high quality bases) assembled on 2009-09-01
> FMO08072.5prime
CAGTCGACATGCGCAACGCCCATCCACAGCTGGAGCAACTGCAGCAGGAG
CTGCGCGACCTAATCTGCGAGCTGTGCAACCGGCAGTACAGCACAAAGAA
TGCCTTGGGCGAGCATTTAAAGCGTCATGCCCAGCGCAAGGAGCACGTGT
GCGAGCACTGTGGAGTGGCCAAGGTGACCCGAACGGAGCTACTGACCCAC
CTGCGCACCCACAATCCCACCTGGGAGCGCTTCAAGTGCGAGCAGTGTCC
GCAGCTCTTTCGCCACAAGAGCGCCATTAGCCGGCATGTTCGGGTGGTCC
ACGAGGGTCAGCGGCGGTTCCAGTGCGGTCATTGCGAGAAAAAGTTTGGC
ACGCATGCCTCGCAGGTGCGGCACGAGCGGCTGCACACGGAATCCACGGG
CTCGGGAGAGGCAGCCGAGGAATGGCCCTTTGCCTGTATTCACTGCCAGA
AGCCTTGCGTTTCGCGACAAACCCTTGAGTTGCACCTACGAAGGCACCGC
GCGAGAAAGACGCACAGAAAACGAAGGGAGCACAGTCGGGAGAGTCAGGA
GCAGGAGCAGGAGCACGACCGCGATCAGGAGCAGGGCGCTCGGGAAGCTC
AACAGGATCAGCTCCGCAAGGGGGAAAAGCTACGGCAGAGAGATCTCTCC
AGGGAAAGCCACCGAAATGAGGTGACCATGCAGACAAGCCAGCGGCCAAA
TGAGTGTCAACAAGGTCAAGAGTCCTACGATCCGGAACCGGATCCGCTGG
AGGCTAGTCAGTGCAAGCTAGAGCAGGAAGATGCACTCGATCCGGAATGG
CAGCACAAAATAGAGCACGACGCAGAATCGCAAGACTCGGCGCGACTGGA
AGGGCATTTCCATGACTACAAACCTATCCCTTCGAAAGCCTTAGCAAGCT
TTCTAAGACAA
FMO08072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-RD | 3235 | CG1529-RD | 741..1627 | 7..893 | 4405 | 99.8 | Plus |
| CG1529-RC | 1815 | CG1529-RC | 741..1627 | 7..893 | 4405 | 99.8 | Plus |
| CG1529-RA | 3246 | CG1529-RA | 752..1638 | 7..893 | 4405 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21030260..21031146 | 893..7 | 4405 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:49:10 has no hits.
FMO08072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:19 Download gff for
FMO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RB | 746..1648 | 1..900 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:14:57 Download gff for
FMO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 745..1647 | 1..900 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:57 Download gff for
FMO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 745..1647 | 1..900 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:57 Download gff for
FMO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21030251..21031148 | 1..900 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:14:57 Download gff for
FMO08072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20901278..20902175 | 1..900 | 98 | | Minus |
