FMO08086.5prime Sequence
989 bp (920 high quality bases) assembled on 2009-09-01
> FMO08086.5prime
CAGTCGACATGAACGGGAGTCACCTTCAAACGGAGCAGTTGCTCTTTGAG
GAGAGGCCACTCCATGTGCCGCCCCTCTCGGAACTGAAAAGAGTCATACA
GGGTGCTCTGGATGAGAACTTTCGGACCGTAGATGTCAGTGTGGAAGCTT
GCCCGGATTTAAGGGACTCCCAGTTTGGCCTTGTGGAGCGTGGACTGGGC
GGAAAGGCCACTCTCCTAGAAGCAGGAGGGCCACCCTATTTGCGGCCCTT
GGTGCAGCGAGATAAGCTCTACAATCTGAAGGAGATCACTCGGCGGACCC
AAGGAGCAGGAAAGATCTTTGCAGTTGGACCGGGAGCAGGTCCGTGGCCC
ATTCGTCACTCCAATTGCGAGGGGATCTTTAATTTCTCGCTAAACGAAGA
GGATGAACTCACTCAAGGAAGCTACACGGCCACTGTGAGGGGAGCGAATG
AGGATTGTGTTCTCGAAAGGATTCCCGAAACCGAATCTCGTGCTGCTCTG
ATCCTGAACCTCTTCCTCAGCGAGGGAAAACCAGGTCAAGTGCTCCGAAT
TTCCGCAAAACAGCGCACTGGAGGGGAAAACTTTGTAGAATGCATTCGCA
AGGGTCTGGAACGGCACTACGGAGACCAGGTGGTGGGCTTGGGAGGAATG
TTCGTGGTCAGGAGGGGATGTGTCCACCAGCACGTAATGCGAGATTTTAG
CAAGACGCCCATCCACACACAGGAACAGATCCAAAACTGGTTGAAGTTCT
ACGAAATGCCCGCCCAGCTAAACGCAGTGGGCACCTTGGTGACCAAGGAC
ATGGGACTGGACCTCCGCCTGCAGCACTTCCACTCGTTTTCCTTTGCAAC
TGGGGAGGCCACTATCACTACGACAACCACGCCGGACATTGTGGAGTACG
AGGCCTATCTGACGTGGCCGAAGAGTGATCCGTGTGACGAACCCGGTGGC
GACGATCAGTTGGCAGAGATGCAAGCTTTCTAAACCATT
FMO08086.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-RB | 1082 | CG32335-RB | 70..1036 | 8..970 | 4615 | 99 | Plus |
| CG9119-RA | 1212 | CG9119-RA | 178..1071 | 30..922 | 1100 | 75.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1201953..1202799 | 936..92 | 4040 | 99.5 | Minus |
| 3L | 28110227 | 3L | 1203468..1204247 | 912..133 | 1000 | 75.8 | Minus |
| 3L | 28110227 | 3L | 1202882..1202967 | 93..8 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:22:56 has no hits.
FMO08086.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:52 Download gff for
FMO08086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 64..1030 | 8..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:05 Download gff for
FMO08086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 70..1036 | 8..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:26 Download gff for
FMO08086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 70..1036 | 8..970 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:26 Download gff for
FMO08086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1201930..1202797 | 94..958 | 98 | <- | Minus |
| 3L | 1202882..1202967 | 8..93 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:05 Download gff for
FMO08086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1202882..1202967 | 8..93 | 100 | | Minus |
| arm_3L | 1201930..1202797 | 94..958 | 98 | <- | Minus |
