FMO08088.5prime Sequence
1006 bp (982 high quality bases) assembled on 2009-09-01
> FMO08088.5prime
CAGTCGACATGGCTCAGTCCACGAATTCCAAGAAGCTGATGATGTTCCGC
ACTCCCAACGAGGAGGAGGCCCTGAAGAATCAGATCTTCATCTTTAACTC
GCCCATTGACTACAAGGACCAGCAGCTGATCGTGTACCAGAAACCAGGCA
TCCTCACCGGAGACAAGGACTACGGCTACTGCGTGGTGTACAAGCGAGAT
CACTACGTGCTCAATAACCCGCCCAACTTCAAGAGCCCCACGAAGAGGAG
CTTCCTCAACGAATGCATCCGCCAGTTGTATCTGATGAACGGCATGGGTC
ACAAGATGTACTGGAGGACTACAAGTGCAATGGCGCTGAGTACACCCGGC
GAAGTGTGGCACCAGGTGAACAGTTGCCTGCTCCCAGAACGACTGACGCC
GCAAAAGGAGAGCCTGAAGCGGGTGAAGAGGCAACTTTTCCGGGATCCAC
GGGCAGATCGCAAGAATCCCAACCCACTCAAAGGCAAATGCTGGGGCACC
CAAGTCTTCTGCTTCAAATCGATGCGCGAGAAGATTGGCAGGAAGTACAT
CCGCCGGGGCTATCTGACCATCGCACGCCGCGAAGCCCTGCAGGAGATGA
TCCGTGAGCACTTGGCACGAGAAATGGTCTGCACTCCGGCCGCATGCAGA
ACGGTAATCAGCGCCTCCGACGGAATCTTCAATGTGAATGCCGGTGTCAT
CGGCGACATCTGTAGCTACCACAGCCACGCGGCTCGCCATCAGCCCGTCG
TGGAGCGCCGTCTGACGGCCGGCGAAGCACGTCTCCGGAACAACGAGGCC
TGTCGCCTGACTCAGCGGGCCAAGCGGCTGGAGGCCATGTTCATACACGA
ACAAGTGCGACGGGCCGTCCAGAACCACAGCTCATTCTGGAGGAGTCGGG
GCGATCCATCTACTATGCCAAGGAGCTCTTCCGCTTTATCGAGGATCACG
GGAAGTTCGTCTACACGACAACAAGATCCTGTCTAAAATCGCAGCTTTCT
AGAACA
FMO08088.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14014-RB | 1127 | CG14014-RB | 28..1012 | 8..990 | 4800 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5549824..5550808 | 990..8 | 4750 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:55:53 has no hits.
FMO08088.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:50 Download gff for
FMO08088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14014-RB | 20..1012 | 1..990 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:13 Download gff for
FMO08088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14014-RB | 20..1012 | 1..990 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:12 Download gff for
FMO08088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14014-RB | 20..1012 | 1..990 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:12 Download gff for
FMO08088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5549824..5550811 | 1..990 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:13 Download gff for
FMO08088.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5549824..5550811 | 1..990 | 98 | | Minus |
