Clone FMO08091 Report

Search the DGRC for FMO08091

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:80
Well:91
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17362-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08091.5prime Sequence

575 bp (575 high quality bases) assembled on 2009-09-01

> FMO08091.5prime
CAGTCGACATGAAAAACGAGATTCGACTGATATGTTGGTATATAAACCAG
AGGATTGAGCTTTCTTCGTTTAGATCACAAAATCTCCCCAAAACGAAAAT
GAAACTTCTTCTGGTTCTGGCATTGGCAGTCTTCGTAGCCCACGTGGCTG
TGGCCCAGACAACTGATTCGTCTGACGATGGAGATTACTCTTACGATTAC
GCTGATGACAACGATACTGCCGGTAGCTCCGAAGACAACACTGCTGATTC
TGGAGACACTAGTGATAGCTCCACTGACGTCGACAGTGGAAACGACTCTG
GGGACGTCGATTCCTATGACGACTACGAGGGCTCTAGCGATGTTACGGAA
GCACCAACTGCTGCTCCAGTTGTCAAAAAGAACAAAAGAGCTGGTGCCAG
GAAAAACAACAGGAACAACAAGAATAAGGCAGCAGCTAAACGTCGCAATG
CCGCCGCTGCCAAGAAAAGTAATAACAAGAAGGCGGCTAATAAGCGAACA
CCTGTTGCCGCCAAGAAGCGGGCAAATGCTGGACCCAACAAACGTAGGCG
CTCTGGAGCAAGCTTTCTAGACCAT

FMO08091.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG17362-RB 565 CG17362-RB 1..494 64..557 2455 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13986564..13987113 8..557 2735 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:41:38 has no hits.

FMO08091.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:49 Download gff for FMO08091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17362-RA 619..1171 8..561 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:25 Download gff for FMO08091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17362-RB 1..497 64..561 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:56 Download gff for FMO08091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17362-RB 1..497 64..561 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:56 Download gff for FMO08091.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 13986564..13987116 8..561 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:25 Download gff for FMO08091.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13979664..13980216 8..561 99   Plus