FMO08094.5prime Sequence
1036 bp (923 high quality bases) assembled on 2009-09-01
> FMO08094.5prime
CAGTCGACATGGTTGGTTTAACCCGAAATACCATGCTGAAAACTCGGGGT
ATTGTGCTTGGCATCAGCAGGTCGTACACCGCCAAGGCGAAGAGGGGTGT
GCTGGCGCAGGACAAGTCGAAGATCAAGGAGTACTCACCGAAGACGACGG
ACAGCCATGAGCACCGAGTTTACGTGTGGGGCTTTCAGGAAACCGGCGCT
CTCGGTCTCCAGACCAACGTGAAGAAGGCCAAGGAACGCTACACGGAGAT
GGTGCACCATCCCACCCGCTTGCAGTTCTCCAACAACAACGAAATCACGG
ATGTGGCCGCCGGCTACGGGTTCACGGTCTACGCCGTGAATAGAGATGAC
GGAGAGACGCTCTTTGGCAGCGGTTTGAACACCGACTCCCAACTGGGTTT
CCAGGTGAAGGGAAATCCCAATGATCCGGCCAACCTTGACGTGATCATTT
ATCCTACAGCCATTAAACTGCCGAGAGTTCAGGGAGAAACAGACGAGGAC
ATGCGTGTGAAGAGCATGTCGGCGGGTAGAGCTCACCTGGTGGTTCTGAC
CCAAAACGGAACCATTTTCACCCTGGGAAACAATTCGTACGGCCAATGTG
GCCGCTCCATCATAGAGGAGGAGCGGTACAGCAAGAGTGCCCTGATCCAC
AGGATATCGCAGAAGATATATGCGGCAAGGAGGATGAGGTGGTCCAGGTG
GAGTGCGGCCAGGACCACAGCATGTTTCTTACCAAAAAGGGACGCATTTA
CACATGTGGCTGGGGTGCGGATGGTCAAACAGGTCAGGGAAACTACCACA
CCGCCGGGCAGATACCCTGATTGGAGGAGATGTGGAAAAGGAGAGATTGT
GCGCTCAGCTGCTTCCTCGGACTGCGTTTGTCCTTAACGAGGGCGGGCGA
TGCCTTGGCTTGGGTCAATTCTGAGTACGACAGCTAGATGACTCAGAGCT
GACCGAACCCAAATAATATCCTAGAGCTCTCACTACGAGTCATCGGAATC
AGATGTGCTGCGAGCCATTTGCATGCCTAACGACAG
FMO08094.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3862-RA | 1533 | CG3862-RA | 39..1022 | 7..982 | 4550 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 824868..825823 | 957..7 | 4285 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:26 has no hits.
FMO08094.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:17:57 Download gff for
FMO08094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3862-RA | 1..984 | 20..991 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:59 Download gff for
FMO08094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3862-RA | 35..1035 | 1..991 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:50 Download gff for
FMO08094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3862-RA | 35..1035 | 1..991 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:50 Download gff for
FMO08094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 824827..825826 | 1..991 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:59 Download gff for
FMO08094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 824827..825826 | 1..991 | 97 | | Minus |
