Clone FMO08107 Report

Search the DGRC for FMO08107

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:81
Well:7
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08107.5prime Sequence

461 bp (461 high quality bases) assembled on 2010-03-10

> FMO08107.5prime
CAGTCGACATGCGAGTTAGTTTCGTTTCAAGCGTCACTGAGATCACAAAA
GCCAACATGAAGTTCGCCGTTGTCGTAGTCCTGTTCGCTTTGGCCTGGGG
TGTCAACAGCTCGGTGGTGCCTCTCCTGACCTCCGCCCATGGTCTGGTGG
TCGGTTCTCCCGCCGTCGCCGGTTCGGTGGCCATCCAGGCATCTGCGGTT
CCCGCTGCCGTTCCCCTGTCCCTGTCCCCAGCCGGACCCGTGCTCATCCA
GTCTGGACCAGCGGTGGTTGCCGCTCCCGTTCCCGCCGCTGTGGTTGCTG
CCCACGCCCCCGCCGTGGTGGCCGTCGCCGCTCCGGAGGCCAGCTATGTG
GCCAAGACCCGTGGAGCTGTCCATGTGGCTCCTCTGCCAGGACATGTGCA
GTCCGCTGCTTCCGTGAACTTGGAACCCGCACCAGGCACCTGGGCAAGCT
TTCTAGACCAT

FMO08107.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG7203-RC 730 CG7203-RC 37..466 14..443 2150 100 Plus
CG7203-RB 697 CG7203-RB 4..433 14..443 2150 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7752434..7752816 443..61 1915 100 Minus
2L 23513712 2L 7753102..7753150 62..14 245 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:19:55 has no hits.

FMO08107.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:30:52 Download gff for FMO08107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7203-RB 2..439 9..447 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:02 Download gff for FMO08107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7203-RB 1..436 13..447 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:10 Download gff for FMO08107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7203-RB 1..436 13..447 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:10 Download gff for FMO08107.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7752431..7752814 63..447 99 <- Minus
2L 7753102..7753155 9..62 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:02 Download gff for FMO08107.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7752431..7752814 63..447 99 <- Minus
arm_2L 7753102..7753155 9..62 96   Minus