FMO08109.5prime Sequence
638 bp (638 high quality bases) assembled on 2010-03-10
> FMO08109.5prime
CAGTCGACATGAATAATATTGAAGAGGACACCGAAGCAGCCTTCAAACGG
CTCCAGGCTGTCATTCCACAGGTGAAGCAGGCCTACGAGGAAGCCATTGG
ACAGATCTTCTCGGATTTAAACTCCTCAGATCTTGAGTCGTGTGCCTCCA
TCCTCGAGGAGCACGAATCCACGAGCCTGGACACCGAGCAAATAATCCAC
AGCACCCGTCGGCTTATGACCAAGATCGTCCTGGATGTGAACCAGTGCTT
CTTCTCCGGCAACGACGTGGAGACCAAGCTGACCACGCTGGAAATGCTTA
AGGAGCAGTTTGCCGCCCACGAGGGCAAGAACTGGAACTTCAACTGTCTG
TCCCCTGAGGAACTTACTCGCCCTCTGCGCATGCACAACTTGAATCTAAG
CATCACATTCATGGAGCAACAGCTTAAGAAACAGGAAAAGGAACTCGAGA
TTGCTATGGCCAAAAGCATTAAAAATCGACAGCTTATACATGATGTCCAC
GCTGAACGGGTGAAAGTGGGATGTATGATGAAGCAGCAGTTGGCCGAGTA
CCAGGCCATTAAGCCACAGTTAATGGAAATGGAACGGCTAATAAATGATT
CGTATGTGCAGGAAGAAATGGCAAGCTTTCTAGACCAT
FMO08109.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nnf1b-RA | 783 | CG31658-RA | 70..681 | 9..620 | 3060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 810809..811022 | 122..335 | 1070 | 100 | Plus |
| 2L | 23513712 | 2L | 811257..811429 | 448..620 | 865 | 100 | Plus |
| 2L | 23513712 | 2L | 811088..811203 | 334..449 | 580 | 100 | Plus |
| 2L | 23513712 | 2L | 810646..810758 | 9..121 | 565 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:09:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 3235..3311 | 16..95 | 113 | 65.4 | Plus |
FMO08109.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:48 Download gff for
FMO08109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nnf1b-RA | 1..615 | 9..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:00 Download gff for
FMO08109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nnf1b-RA | 67..687 | 2..629 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:46 Download gff for
FMO08109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nnf1b-RA | 67..687 | 2..629 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:46 Download gff for
FMO08109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 810643..810758 | 2..121 | 96 | -> | Plus |
| 2L | 810809..811021 | 122..334 | 100 | -> | Plus |
| 2L | 811089..811203 | 335..449 | 100 | -> | Plus |
| 2L | 811259..811435 | 450..629 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:00 Download gff for
FMO08109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 810643..810758 | 2..121 | 96 | -> | Plus |
| arm_2L | 810809..811021 | 122..334 | 100 | -> | Plus |
| arm_2L | 811089..811203 | 335..449 | 100 | -> | Plus |
| arm_2L | 811259..811435 | 450..629 | 97 | | Plus |
