FMO08110.5prime Sequence
1111 bp (1008 high quality bases) assembled on 2010-03-10
> FMO08110.5prime
CAGTCGACATGCTCCTTACCACCGGATCCTATATTGACCTGCCCACCGAA
ATGTTTCTCAGCCTAAGAGAATCGCCAAACAGCAAGCACAAGTGCATGGA
GTTCCAGTCGCCATTCCCCCCCCGCAACTGTGGTTGGCATACGAACAGTT
TGATCTTGAAACTGGCTTATGGAGCCTACATTTCACAGCCCGGACAAGCC
AAGTGGCTGGATTTCAATATAAATGGAGCAGTCAAGGAGGTGCCAGATGA
GCCTGCCTGTGATAAGTCATCCATCGATCTGCAGATGGTCTACAAGCCTC
GCGCAATCGATCAGCAACCATCAGACATTGAAGATGGCAACTGCAATAGC
GCCTTGGTTAGTTGGACCCTTAGATGTAAAGGCGAAGGCGATGATTGCAA
CGATTTTCAAATCTTTAGCACACTATCCATACCAGCAGTTAAGGATTCCA
GCGGCAAGGAACCACTTGGATGCCACTTCATTAAGCTGGAGAACAAGCCA
GACTGCGGTTGCGAAATAATGTCCAAATACGAGTTGATAAGCGCCTGGGT
GCAGTTAAAGCTAATGCGGGCAGAGATGGGACACTGCACACGCATCTCGC
TACGGGATTTTGAGCCAATGCTGGAGGAGAAGCTGACGTTAATTTCGCTG
GAGCAGCAGCTTCATGACTATTATAACACAAGTATGCCGCAGCTACTGTC
CAACTTGTGTGAGTTTTTGAAGCTGCTGGACACGGTACCCGCTGGAGATT
ACCTGCTGCGATACTCACCCAAGTACAAGGATAAGTTCCTGCTGTGCATT
GTCACCAAGGAGGCCACGCCACAGAGTTTTCAGCTACACCAGCTCCTCAC
GGAATCCATCCCCAGCGACCAAGCCTTCCTTACGCAAAGCAGCTACCTTC
CGATCTCGCTCACTCTTTGTGGCCGCCTGCACGAGGAGCTCCATCTACTG
CCCTGTGCATTTCCAGCAAAAGCCAACGGTCGCTCTGTCAGCGTCGAAAG
GTGGTGGGTGCCCATAACAGAGCCTCCGACAAGCTCCAGTAGACCGCACG
TTAAAAGTGGAGCGAGCCCAACTCGGATTCGACGTCGATGTAAGGTGATC
AAGAAAAGAGC
FMO08110.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ice2-RC | 2350 | CG10825-RC | 944..2061 | 9..1111 | 5165 | 98.2 | Plus |
| Ice2-RA | 2505 | CG10825-RA | 1099..2216 | 9..1111 | 5165 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21131314..21132329 | 9..1024 | 4955 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:23 has no hits.
FMO08110.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:41 Download gff for
FMO08110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10825-RC | 935..2058 | 1..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:54 Download gff for
FMO08110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice2-RB | 1011..2134 | 1..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:21 Download gff for
FMO08110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice2-RA | 1093..2216 | 1..1111 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:21 Download gff for
FMO08110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21131308..21132431 | 1..1111 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:54 Download gff for
FMO08110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16957030..16958153 | 1..1111 | 97 | | Plus |
