FMO08117.5prime Sequence
803 bp (803 high quality bases) assembled on 2010-03-10
> FMO08117.5prime
CAGTCGACATGTCTAAAAAGCTGGTATTGTTGCTATTGTTTGTTGCCACT
GTCTGTGCCCACAGGAATCGCAATCGTACGGCTCATCATGGTGGTGGTCC
CAAGGACATCATTGTAAATGGCTATCCAGCCTACGAAGGCAAGGCACCAT
ATGCTGTGGGCCTGCGAATGAACAATGGAGCCGTGGGCGGAGGTTCCGTA
ATTGGAAACAATTGGGTCCTGACCGCTGCCCATTGCCTGACCACCGATTC
CGTGACCATACACTACGGCTCGAATCGTGCCTGGAACGGTCAGCTTCAGC
ATACGGTGAACAAGAATAACTTCTTTCGCCATCCAGGATATCCCAATAGC
GCTGGTCACGACATCGGACTCATTCGCACCCCGTACGTCAGCTTCACCAA
TCTGATCAACAAAGTTTCGCTGCCCAAGTTCAGCCAAAAAGGTGAGCGTT
TCGAGAACTGGTGGTGCGTGGCCTGCGGCTGGGGAGGAATGGCCAATGGA
GGATTGGCCGACTGGCTGCAATGCATGGACGTGCAAGTCATTAGCAACGG
AGAATGCGCCAGGTCATACGGATCGGTGGCCAGCACTGATATGTGCACCC
GGGCCACCGATGGCAAGTCCGTGTGCGGTGGCGACTCTGGCGGAGCACTG
GTCACTCACGACAATCCCATTCAAGTGGGCGTTATCACCTTTGCATCCAT
CGGCTGCAAGTCTGGACCATCGGGCTACACCCGTGTGTCCGATCACTTGG
ACTGGATCCGAGAGAAGTCGGGAATTGCCTATTACGCAAGCTTTCTAGAC
CAT
FMO08117.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8329-RA | 910 | CG8329-RA | 15..792 | 8..785 | 3890 | 100 | Plus |
| CG18179-RA | 870 | CG18179-RA | 400..800 | 360..760 | 430 | 74.4 | Plus |
| CG18180-RA | 901 | CG18180-RA | 491..789 | 462..760 | 385 | 76.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9638126..9638903 | 8..785 | 3890 | 100 | Plus |
| 3L | 28110227 | 3L | 9639670..9640070 | 360..760 | 430 | 73.8 | Plus |
| 3L | 28110227 | 3L | 9641503..9641801 | 462..760 | 370 | 74.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:02:19 has no hits.
FMO08117.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:58 Download gff for
FMO08117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8329-RA | 15..795 | 8..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:50 Download gff for
FMO08117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8329-RA | 15..795 | 8..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:35 Download gff for
FMO08117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8329-RA | 15..795 | 8..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:35 Download gff for
FMO08117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9638126..9638906 | 8..789 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:50 Download gff for
FMO08117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9631226..9632006 | 8..789 | 99 | | Plus |
