FMO08119.5prime Sequence
971 bp (924 high quality bases) assembled on 2010-03-10
> FMO08119.5prime
CAGTCGACATGTCGCAACGCTTTGCACCTGGCCAAGCGCCGGTGCAGTCG
CGTTATCAGCCACCACCACCGGCGCCCGGCATGCGTCCCTATCCGCCGCC
AGGCGCCTCTTTTCCACCGCGCGGGTTTCCCCTGCATCCGAACACTACTC
AACCTGTTCCCGGCACGGCGAACGTGGCCGGGGTACCGGGAGTTCCTGGA
GTACCCGGCGTACCGGGACCATCGCTACTGCAGCGCGCCGCCCAACAGCC
GGGCTTTCAGAGCAGCCTTCGCGGTACTGGAGCCGGAGGTGGCGGTGTTG
GATCCGGCGGAGGCAGCAAGAGGTCAAATGAATCCCGCAGTTTGGGTGGC
GGTGGTAGCAAAAGTGATTTTGCGACGGCCAAAAAGAAAAAGAAGCTGGC
CGAAAAGATACTGCCGCAGAAGGTGCGGGATCTGGTGCCCGAATCGCAAG
CGTACATGGATCTGCTGACGTTTGAGCGAAAACTGGATGCCACCATAATG
CGCAAACGTCTGGACATCCAGGAGGCCCTCAAGCGCCCCATGAAGCAGAA
GCGCAAGCTGCGCATCTTCATCTCGAACACATTCTATCCCAGCAAGGAGC
CCACAAATGATGGCGAGGAGGGCGCCGTTGCCTCTTGGGAATTGCGGGTG
GAGGGTCGCCTGTTAGAGGATGGCAAGGGCGATCCCAATACAAAGATCAA
ACGCAAGTTTTCGTCGTTTTTCAAGTCGCTGGTTATCGAGCTGGATAAGG
AACTGTACGGTCCGGACAACCATCTGGTCGAGTGGCATCGCACTCACACC
ACCCAGGAGACGGACGGGTTCCAGGTGAGCGGCCGGGCGATCGCAATGTG
CGCTTGCACCATCCTTCATGCTGCTTGACTACCAGCCGCTGCAGTTCAAG
CTGGACCCGCGATTCTCAGGTTGGTTGGCTTCACACAAAACAAGACGGGT
GATCTATCCGCCTGGGGGATT
FMO08119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bap60-RA | 1936 | CG4303-RA | 136..1092 | 9..962 | 4470 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13158403..13159197 | 912..117 | 3820 | 99.5 | Minus |
| X | 23542271 | X | 13159266..13159373 | 116..9 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:08:52 has no hits.
FMO08119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:30:59 Download gff for
FMO08119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bap60-RA | 199..1126 | 2..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:59 Download gff for
FMO08119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bap60-RA | 129..1056 | 2..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:21 Download gff for
FMO08119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bap60-RA | 129..1056 | 2..929 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:21 Download gff for
FMO08119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13158372..13159197 | 117..940 | 98 | <- | Minus |
| X | 13159266..13159380 | 2..116 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:59 Download gff for
FMO08119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13053299..13053413 | 2..116 | 96 | | Minus |
| arm_X | 13052405..13053230 | 117..940 | 98 | <- | Minus |
