FMO08121.5prime Sequence
1034 bp (-89 high quality bases) assembled on 2010-03-10
> FMO08121.5prime
CAGTCGACATGGCCAGCGAGTCCTCGACCGAACGCGACAGCGATCTATAC
GATCCTTTGGCCGAGGAGCTGCACAACGTCCAGTTGGGCAAACATGTGAC
CCGCGAGAATATTGATGCCCTGAATGCCAAGTTTGCCAACCTGCAGGAGC
CACCAGCCATGTACTTAATAGAATACCAGGAGTTGACCTCCAAGCTCCAC
GAACTGGAGGCCAAGGAGCAGGAACTAATGGAGCGACTGAACTCGCAGGA
CCAGCAGGAGGACTCCTCCTTGGTCGAGCGGTTCAAGGAGCAGCCCCACT
ATCAAAATCAAACTCAAATCCTGCAGCAACAACGGCAATTGGCGCGAGTG
CACCACGGCAACGATCTAACCGATAGCTTGGGCTCTCAGCCGGGCAGCCA
ATGTGGAACTTTGACCCGTCAGCCCAAGATCCTTTTGCGAGCCCACCTGC
CCAATCAACAGCGCACTTCAGTGGAGGTAATTTCGGGAGTACGACTATGT
GATGCCCTCATGAAGGCCCTGAAACTCCGGCAACTAACGCCGGATATGTG
CGAAGTAAGCACAACTCATTCCGGAAGACATATCGTACCCTGCCACACGG
ATATCGGCACTCTGCATGTGGAGGAGATCTTTGTCAGGCTGCTGGATAAG
TTTCTCATTAGGACACACATCGAGCACCAGATCATACGGAAGACCTTCTT
CTCGTTGGTATTCTGCGAGGGCTGTCGAACGCTTCTGTTCAGCGGGTGTC
TACTGTAGTCAGTGTAATTTTCGATTCATCAGAGGTGTGCCAATACAGTG
CCGATGCTGTGCCGCCCTTTCCCATGGATAGCTACTATCAGCTACTGCTG
CCGAGAATCCGGATAATGGCGTTGGTTTCCCCGGCAGAGCACTGCTGTCC
GCTTCCATATGAGCAGCAGGAGTCGACGTCGTCGATGAATCAGCAGTGGC
AGCAACATCAGCTCGAAGCCTACATCTTCATCATCGGCATCATCGTACAG
GTCGTTCGACGAGGATCAGTCAATGACGATCGAT
FMO08121.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| phl-RE | 4247 | CG2845-RE | 1588..2618 | 8..1034 | 4515 | 96.4 | Plus |
| phl-RA | 3247 | CG2845-RA | 588..1618 | 8..1034 | 4515 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:55:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2341176..2342044 | 170..1034 | 3555 | 95.8 | Plus |
| X | 23542271 | X | 2340885..2341048 | 8..171 | 760 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:55:43 has no hits.
FMO08121.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:00 Download gff for
FMO08121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phl-RC | 424..1422 | 1..995 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:02 Download gff for
FMO08121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phl-RA | 754..1752 | 1..995 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:21 Download gff for
FMO08121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phl-RA | 582..1580 | 1..995 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:21 Download gff for
FMO08121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2340879..2341048 | 1..171 | 95 | -> | Plus |
| X | 2341178..2342006 | 172..995 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:02 Download gff for
FMO08121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2234912..2235081 | 1..171 | 95 | -> | Plus |
| arm_X | 2235211..2236039 | 172..995 | 96 | | Plus |
