FMO08124.5prime Sequence
1107 bp (991 high quality bases) assembled on 2010-03-10
> FMO08124.5prime
CAGTCGACATGGAAAGAGGATGCCCAGCTGCTAGCAGTGAATCCGTGACC
AGTGCAGGGGAGCGTACTCAGTCAGCAGTCACCAGCTCCACCTCCACGTG
GGTCAAGAGTCAGGCCTCAACCAGCCGAAAAACAGAAGCATCAGAAGAAT
CGGGATTAGGAGCAGTAGACGCAGAAGTAGGAGCCGGCAGAGAAGCCTTT
GTATCTATGTCAACGCTGCGGGAGGATGTGGAGGACGTGTGTGTGTCGTC
AAACTCACAACATGGTTTCGCCGTAGTTTTGGACGACGAGTCCAGCACAT
TTGAGATTAGCTCTTCCAACTCACTGCCCACCAGTGCGGGGGCGGCGTCC
ACAGTGGGAGTGGTGGCCGTCGACGACAGCTCCTCCACGGATACCTTGAA
CGGTGGTCATCCTGACTTAGGTCACCCCGCCTCATCGGAACACAGTCGTC
AGGGCTTTTTTAATGAGGATAATGAAGATCCTCCGGTTGTATGCCTTATA
AACGACGATGACGATGATGAGGAACCCGAGCCGGAGGAGGACGATGAGGA
GGAACTGATTGAAGACGAGGACGAGGACGCAGTGGACATTGTAACGGGCG
CCATCAGCTGCCCCAACACATCACAGTTGGCTTTAGCCGACGGCACCATC
ATGGCGGCCGATGGATCTAAGATCTTCCTGGAGACGCCCGTCGTGGAGGA
GGCCCAGCCGCATCCCGGTCAGGTAGTCACAACGGGATCCCAGTCGGAGC
TCACAGGCAAGCCAAAAAGATTGAGCGATGAGTTCTTGCTGGGTGAGGAA
GACCAAGCAGAGAACCTGGCTTTGGGAAGATGTATTAAGTCTGAGCCGGT
TAATCCCGTGACGACAATCCATCTGAAGGCGACGATGGGGCTACTTGCTT
CTCACTACATGACCGTCTTATGTCAGTGCGCCTGAAGCAGATGAGCCTCA
CGGCCACACCGTTTCGAATCCCTCGCAGCAGCTCTGCACGCCGCGCCCAG
AGGAGGCTCACTTCACTCAGCTCACTTCAGCTCTTGCTTGTCAGGCGACA
TGAGTCATGGATCTGATCGAGCGCTCCGACTTGGAACCGGACAGCGTCTA
CGGGCGG
FMO08124.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:55:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ago-RA | 5223 | CG15010-RA | 110..1230 | 9..1107 | 4950 | 97.3 | Plus |
| ago-RB | 5268 | CG15010-RB | 155..1275 | 9..1107 | 4950 | 97.3 | Plus |
| ago-RC | 5332 | CG15010-RC | 219..1339 | 9..1107 | 4950 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:55:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4250832..4251801 | 976..9 | 4750 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:55:34 has no hits.
FMO08124.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:51 Download gff for
FMO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ago-RA | 172..1147 | 2..976 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:55 Download gff for
FMO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ago-RC | 213..1188 | 2..976 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:17 Download gff for
FMO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ago-RC | 213..1188 | 2..976 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:17 Download gff for
FMO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4250832..4251807 | 2..976 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:55 Download gff for
FMO08124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4250832..4251807 | 2..976 | 99 | | Minus |
