FMO08127.5prime Sequence
1085 bp (968 high quality bases) assembled on 2010-03-10
> FMO08127.5prime
CAGTCGACATGCTGCTAAAAAAGTATGTGAAAACGCGGCGTAAGCTGAAG
ATTCTACTCCTGCTGGCCATCGTCGCCCTGCTGGTCATCACCATCATAGT
GCTGGGCTCCAGCGGACGCAATGCGGCCATCGAACTGCTGCTGGACGAGC
GATTCATCGCACGCGCCTACAGGCCCGGGGATCAGCCCCAAGTGGCGGAG
AAGCCGCCGCCGGTGGCCGTCGCGCTGCTCCAGCCGCAGCGGGAGAACGG
AGTGATTGTGCCCGAGAAGTATGACGAGCAGAAGATCAAGGAGCGCATCA
TTCAAAGCAAAATCGATCTGATGAAGCAGCAGCAGCAGCGGGACCACGAG
GCGGAGCAGTCTTCGCGTACCACTTTGGATGTGGTGATCAGTGCAGTGCA
CATATTCTACACTGCCCCGGTGCCGTGGTACAAGTCGAAGAAGCCGCCTC
CGCCGCCAGCGGAGCACCCAAACGATGTGCCACTGACCACGCCGCGACCA
GTGCGAATCCTAAACACCGCCTTCTATCCGGCACTGGGTCTGTACAAGCC
CAGTGGCTCGCTGCTGGCCCAGCATTTCGAGAACATACGCAGCTGTGGCA
TCGGTGTGCTCATCCTGAGCTTCTCCGGTGGCAAGCCCGCGGAGGCGGCA
CTGCTGCATCAGATCTTGGAACTGGCACCGCAGCACAATCTTAGCGTTAC
CTTTGAGCTCAGTGTGGCCGGGAATCAGAGCGTGGAGTTTGTGCGCCAGC
AGCTGCAGGAGATTGCCACATACACCAGCCTAGCTGGATTCTACAAGGTG
TGGAGTCAGTCGAGAGGTGTCTCCCTGCCGGTTCTCTACGTGAGCAATGC
CTACAAGTTGAGTGATAGTCTGGGAAGGCTGTTGTGTCGATCGCCTTCGC
TGGTGCACCGGATGGTCTGCGGAGAATTCTGGATGCCTTATTCATTGGAC
AATAAGGTTCAAAGCCATGCCGAAGTCCTGCGAGTGGTGCTTCGATGGGT
TCTATAGCCAACTGCCCAGCAATGGAGCTGTCCTTCCTCAGACCTGAAGA
CATGGCGAATCTGAAGTCATTGGCCTGTCTCAAAT
FMO08127.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14015-RA | 2148 | CG14015-RA | 87..1165 | 9..1079 | 4925 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5538094..5538683 | 951..363 | 2885 | 99.7 | Minus |
| 2L | 23513712 | 2L | 5538757..5539110 | 362..9 | 1755 | 99.7 | Minus |
| 2L | 23513712 | 2L | 5537951..5538024 | 1032..961 | 215 | 89.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:40:43 has no hits.
FMO08127.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:10 Download gff for
FMO08127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14015-RA | 60..1147 | 9..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:22 Download gff for
FMO08127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14015-RA | 87..1174 | 9..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:37 Download gff for
FMO08127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14015-RA | 87..1174 | 9..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:37 Download gff for
FMO08127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5538088..5538683 | 363..956 | 99 | <- | Minus |
| 2L | 5538757..5539110 | 9..362 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:22 Download gff for
FMO08127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5538088..5538683 | 363..956 | 99 | <- | Minus |
| arm_2L | 5538757..5539110 | 9..362 | 99 | | Minus |
