FMO08129.5prime Sequence
1072 bp (884 high quality bases) assembled on 2010-03-10
> FMO08129.5prime
CAATCGACATGTTGATCTCGTGCAAATGCTCGAATTTCGTTGCTTCGACT
TCGAAATTGCAGCGCAGCAACAGCAGCAGCGGCGCAGGGGGCCGCGTGGG
CGGTGCAGAGGTCGCCAGCGGCGAGGTACCCACCGCGATCCTCCTGTCGC
AGGTGTTCCAGCATAAGTATCCTCTGGACTTCGTCTTCTACAGCCATATC
ATGGAGTTCTTTAAGCACGCCTATGGTCCCATTCCAGACCTCACCGTGGC
TGTGATTAATCAGCGGGAGCTGTTGTATGGTCTCACCCTGGAAGCCGCTG
GCCAAAGTTGGCAGCTGAGCCTGTGCATCAACTGCAAGGAGGTGCTATGC
GCCAAGCGATTGACGGCGGGCGCCGGGGCCACGCCCACTCTCTACCTCAT
CAACTGCACGCTGTTGACCAGCAGCGAGGAGCTGGCTCAACGGAAGTCCA
ACAAAGCCTTCTCGGAGACCTTCGAGCTGCTGATCATGGATCACACAGGC
AGTGACTCTGGATCCACTCGACCCACCAGTGGACTATCCAACTCCGCATC
GAGTCTAAGCATCGGATCCCTGTCTTCGAATCCCACTGATGCCAGGGTGC
AGAGATTGAGAATGATACAAGCGCACCAGCAGGCGCGATTGCAGGAGGAG
ATTGTGGAGACAAATGAGAGAATCGAGCGGTATACGCGCACTCAGTTCCA
GTTACTAAACAGTTTCCGGGAGAAATCGGATCAGGACTGCGCGTTGCTAT
TCAAAGTTATTCGTGCGTTGCCCGAGCAGGCCTCGGAGCTACTCGATCGT
GCCATGCTCCCTGCCCTTGATGTGGCGGCCAATCAGTCGCAGAGTGCGAC
TGCCCGGCGCAGGAACACCATCAGCAGCCGGTAGGGAGTGAATGGTGGAC
CAGCCACACCCACTACTACGTTGAACATTCTGCCAACTTCTATCGCTGAC
CAGCAGCAGCAGCACAGTGCTGACGCAGCACAGCAGCTACAGTTGCAGCG
CAACAGCAGCAGCAGCAGCATGTCCCTGCTGAGTGTCTCGATGTCAGAAA
ATGTCCACTTGAACACCCACCG
FMO08129.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| L-RA | 2632 | CG10109-RA | 394..1435 | 8..1043 | 4745 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14495152..14495982 | 219..1043 | 3490 | 96.9 | Plus |
| 2R | 25286936 | 2R | 14481580..14481791 | 8..219 | 1045 | 99.5 | Plus |
Blast to na_te.dros performed 2014-11-28 20:04:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 157..214 | 64..121 | 110 | 65.5 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9187..9244 | 64..121 | 110 | 65.5 | Plus |
FMO08129.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:13 Download gff for
FMO08129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| L-RA | 372..1439 | 1..1060 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:28 Download gff for
FMO08129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| L-RA | 388..1455 | 1..1060 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:36 Download gff for
FMO08129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| L-RA | 388..1455 | 1..1060 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:36 Download gff for
FMO08129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14481574..14481790 | 1..218 | 97 | -> | Plus |
| 2R | 14495152..14496002 | 219..1060 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:28 Download gff for
FMO08129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10369079..10369295 | 1..218 | 97 | -> | Plus |
| arm_2R | 10382657..10383507 | 219..1060 | 96 | | Plus |
