FMO08136.5prime Sequence
1105 bp (887 high quality bases) assembled on 2010-03-10
> FMO08136.5prime
CAGTCGACATGAGACACAATCGACTGAAGGTCCTGATCCTGGGACTCGTC
CTCCTGCTGACATCTTGTCGAGCGGATGGACCGCTGCACAGTGCGGATCA
CGGCATGGGCGGAATGGGCATGGGTGGTCACGGCCTGGACGCGAGTCCCG
CACCCGGTTACGGAGTGCCAGTCATACCCAAGGATCCCAATCTGCGATGC
GAGGAGATCACCATACCAATGTGTCGGGGCATTGGCTACAACATGACATC
CTTCCCCAACGAAATGAACCATGAGACCCAGGACGAAGCGGGCCTGGAGG
TGCACCAGTTCTGGCCCCTGGTGGAGATCAAATGCTCGCCGGACCTCAAG
TTCTTCCTGTGCAGCATGTACACGCCCATCTGCCTGGAGGATTACCACAA
GCCGCTGCCCGTTTGCCGGAGTGTCTGCGAGAGAGCCCGCTCGGGATGCG
CACCCATCATGCAGCAGTACAGCTTCGAATGGCCGGAGAGAATGGCGTGC
GAGCACTTGCCTCTTCATGGTGACCCCGACAATCTGTGCATGGAACAGCC
CTCGTACACGGAGGCTGGCAGCGGTGGCAGCTCGGGCGGATCGGGTGGCT
CTGGCAGCGGTTCCGGCTCCGGCGGCAAACGGAAGCAAGGAGGCAGTGGC
TCGGGCGGCAGTGGGGCCGGCGGCAGCAGCGGTTCCACCCTCAACGAAGC
CGTGCCGCGGACGCAATTCAAAAAACTGCCAAAATCCCCAAGGAGAAAAG
GCAAGCGGAAAGAGTGCAGCTGCTCGTGCCGCTTCCCACTCATCTTCCTG
GGGAGGAGCAGCTGCTGCAGCAGCAGTCGCAGATGCCCATGATGCAACAT
CCACACCCCTGGGACATGAACCTCACTGTCAAAGGATCGCCCGCGTTTCA
AATGGCGGCATACCTGGCAGGGCCCCTTCTTATGCACAAATAAAAGGATT
TCCCGGCCTCTCGGATACCCTGGTGGCTGGGATGGGTTTTCGTGACCACC
CCTTACCACTACCCATCTATTCTCACACCGTAAGGGTTAGATACCGGGGA
CGGGCATGTGCTCCCCTCTCGCCCGCTATCTTAATGGGGGTAGCGGTTAC
TGTGT
FMO08136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 385..1342 | 9..961 | 4380 | 97.6 | Plus |
| fz2-RF | 4448 | CG9739-RF | 1060..2017 | 9..961 | 4380 | 97.6 | Plus |
| fz2-RE | 4345 | CG9739-RE | 957..1914 | 9..961 | 4380 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19145379..19146286 | 914..9 | 4225 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:02:52 has no hits.
FMO08136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:01 Download gff for
FMO08136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RC | 1049..1970 | 1..922 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:05 Download gff for
FMO08136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 951..1872 | 1..922 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:46 Download gff for
FMO08136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 951..1872 | 1..922 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:46 Download gff for
FMO08136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19145333..19146292 | 1..957 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:05 Download gff for
FMO08136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19138433..19139392 | 1..957 | 97 | | Minus |
