FMO08139.5prime Sequence
224 bp (224 high quality bases) assembled on 2010-03-10
> FMO08139.5prime
CAGTCGACATGATTCGAATTTTGGTTTTAATGATTACATTCACTCTAATG
ACTGGTAGCGCTCTTTGTTCTATCGAGCAACTTATGCGGGTCTTTGGCGG
TGGATCTGTTGGAGGAGGTTCTAGGCTGGACATCAACAGAAGGGTAACTA
TAGTACCACCCGAAGGCGAACTCTCGTTTGGATATGGCTTTCGTCCTGGA
TTCTATGCAAGCTTTCTAGACCAT
FMO08139.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PebII-RB | 608 | CG2665-RB | 48..246 | 8..206 | 995 | 100 | Plus |
| PebII-RA | 379 | CG2665-RA | 48..246 | 8..206 | 995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25173930..25174113 | 206..23 | 920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:36:33 has no hits.
FMO08139.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:32 Download gff for
FMO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PebII-RA | 21..222 | 1..206 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:56 Download gff for
FMO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PebII-RA | 21..222 | 1..206 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:48 Download gff for
FMO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PebII-RA | 45..246 | 1..206 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:48 Download gff for
FMO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 25173930..25174112 | 24..206 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:56 Download gff for
FMO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 21061453..21061635 | 24..206 | 100 | <- | Minus |
