Clone FMO08140 Report

Search the DGRC for FMO08140

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:81
Well:40
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13838-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08140.5prime Sequence

299 bp (299 high quality bases) assembled on 2010-03-10

> FMO08140.5prime
CAGTCGACATGGACAGCGCCGATGAGCAGCTGCAGCTGGATCTGGACAGG
ATATCGATGGAGAGTCGCCAGGCCAGCAGTTTCGATGACCTCATCGAGCT
GACCAACAACTCGGAGCGTCTGATGGCCAGAGTCAATTCCAGCTTGGATG
ACCTAAACACCGCCCTCGACAACCTGGAGGCTCGAACGGACCGGGTTCTG
GTCGAGATTCGGAGGCTAATCAGCTCGGAAATGCCGGCACAAGGTCCGCA
CGATGGATGTGGCGATCCAGATGCCAGGGCGGCAAGCTTTCTAGACCAT

FMO08140.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13838-RA 429 CG13838-RA 93..365 9..281 1365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23042333..23042605 9..281 1365 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:12:12 has no hits.

FMO08140.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:35 Download gff for FMO08140.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13838-RA 85..370 1..287 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:13 Download gff for FMO08140.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13838-RA 85..370 1..287 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:25 Download gff for FMO08140.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13838-RA 85..370 1..287 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:25 Download gff for FMO08140.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23042325..23042610 1..287 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:13 Download gff for FMO08140.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18868047..18868332 1..287 97   Plus