FMO08148.5prime Sequence
1116 bp (979 high quality bases) assembled on 2010-03-10
> FMO08148.5prime
CAGTCGACATGGCCACCACCCAGCAGTACTCGCTGCGGTGGAACAACTAC
CTGCGCCACCTCACCTACTCCCTGGACAACCACCGGCTGAACGATGACTT
CGTGGACGTCAGCCTGTGCGTGGATGGACGCAGGATCAAGGCCCACAAGG
TGGTACTCTCCTCCTGCTCGTCCTACTTTAAGGAGATATTCAAGGAGAAC
CCACATCCGCATCCAGTCATTATATTTAAGTTTATCAAGTTCGAGGATCT
CAATTCGATTATCGAGTTCATGTACCAGGGCGAAGTCAATGTGCAGCAGG
AGGCGCTGCAATCGTTCCTGCAAACTGCCGAGCTGCTGGCCGTCCAAGGA
CTCACCGCCGAGGAGAAGGAGAAGCCGCAGATCCCGGTGGCGCCGCTGAT
CAGCGAGCACAAGCTGATCAAGACCATACCGAGCACCATACGCGCGGTCA
ACGAGCAGCAGCAGCAGGTGTCCAATGTGGCCCAGGCGCAGACAGCTACG
CAAACCATCGAAATACCCGCGGCCACTTTGCTGCAAGCCACCAACGCCAG
CCAGGTGCCATCGCAGGTGGTCGCAGCAGCCGCAGCAGCCGCAGCGGCAC
AACAGCTGCAGGTCCAGCATCAACAGCAGCAGCATCACCATGTACAAACC
ACCCAGATTCAGCACATCCAAGTGCAATCGGCACCGCCCCCGCAACAGCA
GCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGC
AGCAGCAGCAGCAATCACAGCAGCAACAAACGACGCCCGTGCAGACGCAA
CACCTGACCATCACCAATGCGGTGGCCCTGCCGGCGGCCAGTTCGGTTAA
GAAGCGAAAGATCACGTTCTCGGACGACGACGACAACATGTACACCACCG
AAACCGTTGACTACGCCGTCAAGGATGAGCAGACCATAGTGAAACTGCCG
AGATGACTTTCCTGCGCGGCGCGTCAGATGGACATACCCGATTACATTGT
TGGCGAAGTGATGACCGCCTGTCGATGGAGCACGCGCAAACGTTGCAGGA
TGCACCTCGCACGGCGCGAATTGGGCCAGTATCATCGATATGAAATACTC
CCGATTCGAATGGAGA
FMO08148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12236-RB | 3038 | CG12236-RB | 358..1464 | 9..1100 | 5100 | 98.3 | Plus |
| CG12236-RA | 2335 | CG12236-RA | 358..1464 | 9..1100 | 5100 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5908869..5909536 | 277..944 | 3340 | 100 | Plus |
| X | 23542271 | X | 5908492..5908762 | 9..279 | 1355 | 100 | Plus |
| X | 23542271 | X | 5909613..5909695 | 945..1024 | 265 | 96.4 | Plus |
Blast to na_te.dros performed 2014-11-28 19:15:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 2031..2066 | 414..380 | 114 | 83.3 | Minus |
FMO08148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:20 Download gff for
FMO08148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12236-RB | 361..1436 | 1..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:51 Download gff for
FMO08148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12236-RA | 361..1436 | 1..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:20 Download gff for
FMO08148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12236-RA | 351..1426 | 1..1067 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:20 Download gff for
FMO08148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5908485..5908761 | 1..278 | 98 | -> | Plus |
| X | 5908871..5909537 | 279..944 | 99 | -> | Plus |
| X | 5909613..5909744 | 945..1067 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:51 Download gff for
FMO08148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5802518..5802794 | 1..278 | 98 | -> | Plus |
| arm_X | 5802904..5803570 | 279..944 | 99 | -> | Plus |
| arm_X | 5803646..5803777 | 945..1067 | 91 | | Plus |
