FMO08149.5prime Sequence
553 bp (552 high quality bases) assembled on 2010-03-10
> FMO08149.5prime
CAGTCGACATGCCCTTCGTCCAGCGCGTGGTGCAGCCCGTCAATGTGGCC
CAGGCCACGGCGGCCAGTTTGGGCCACGCATCCGGACGATTCCACTGCAC
GCCGGGCAAGTGCCGGAACAACAACTGCATTAACAAGCAGTCGCCGGATG
TAGAGGTCCCCAATGGCCACGGATCACCCACATCCCTTACCAGGGTTCTG
GTTCACCAGGCGCCGGAGGATCAACCCGTACCGCCCGCTCCGGCACCCAT
GAAGAAGCTAAAGCACCACGTCGAGTTCCTGTCCACCTCGCCCACTCGCC
ATCAGTCGCAATCCCTGCCCAATTCGCGGCATCCCAGCCAGCAGAGGCCG
GCGCTTGGAAGGATCGCCAGTGCACCGCAGTCGCCCACTGCCGGCTCCTC
CAAGGTGGTCTCCGGCCACGAGTTCGACTCGATCAGCAACATAACGCTGA
GCAACGCCCTGCGGCAGCTGGCCAGCTTGGTCCTCATAGTCAGCGATATC
TTCGACGACCTGCAGCGGGATCTGCAGGCGGTGGGCGAGCGGGCGGGTCG
TGT
FMO08149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gukh-RE | 6191 | CG31043-RE | 482..1026 | 9..553 | 2695 | 99.6 | Plus |
| gukh-RC | 4011 | CG31043-RC | 482..1026 | 9..553 | 2695 | 99.6 | Plus |
| gukh-RA | 6268 | CG31043-RA | 482..1026 | 9..553 | 2695 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18984506..18985050 | 9..553 | 2695 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:27:10 has no hits.
FMO08149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:45 Download gff for
FMO08149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gukh-RA | 473..1026 | 1..553 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:08 Download gff for
FMO08149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gukh-RA | 473..1026 | 1..553 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:28 Download gff for
FMO08149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gukh-RA | 473..1026 | 1..553 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:28 Download gff for
FMO08149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18984497..18985050 | 1..553 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:08 Download gff for
FMO08149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14810219..14810772 | 1..553 | 98 | | Plus |
