FMO08150.5prime Sequence
479 bp (479 high quality bases) assembled on 2010-03-10
> FMO08150.5prime
CAGTCGACATGGAAATAACACTCGCTCTGATAAAGCCGCACGTGCTGCGG
AATACCTATGCAATGCAGCAGATCCGAGCCCTGATCTCCCAGAACTTCAC
CATTCTTGACCAGAAGGAGGTTTGCATTACGAAAGAACTATCTGAGCGAT
TTTACGCGGAGCATAAGGGAAAATTCTTCTACCACCGACTAACCAGTTTT
ATGAACAGCGGACCCAGCTACGCCCTGATTCTCCAGTCGGAAACCTGCAT
CCAGAAGTGGCGCAGTCTTCTGGGTCCCACCAAGGTGTTCCGTGCCGTGT
ACAGTGATCCCAACTGCATCCGGGCATTGTACGGAATATCCGACACTCGC
AACGCCTGCCATGGATCCGACAGCGAGGCATCCGCCCTCCGCGAGATCAG
CATCCTGTTCCCGGAGTTTGACGCGGCTGTTGGGAGTCGCCAGGCGAAAA
GGGAGGAGGCGGCAAGCTTTCTAGACCAT
FMO08150.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nmdyn-D6-RA | 864 | CG5310-RA | 74..529 | 6..461 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14584026..14584281 | 206..461 | 1280 | 100 | Plus |
| X | 23542271 | X | 14583750..14583952 | 6..208 | 1015 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:18:24 has no hits.
FMO08150.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:46 Download gff for
FMO08150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nmdyn-D6-RA | 55..513 | 1..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:05 Download gff for
FMO08150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nmdyn-D6-RA | 71..529 | 1..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:25 Download gff for
FMO08150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nmdyn-D6-RA | 71..529 | 1..461 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:25 Download gff for
FMO08150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14583747..14583952 | 1..208 | 99 | -> | Plus |
| X | 14584029..14584281 | 209..461 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:05 Download gff for
FMO08150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14477780..14477985 | 1..208 | 99 | -> | Plus |
| arm_X | 14478062..14478314 | 209..461 | 100 | | Plus |
