FMO08153.5prime Sequence
1073 bp (933 high quality bases) assembled on 2010-03-10
> FMO08153.5prime
CAGTCGACATGTTGCCGCATATAAGTGCCGACGAGGCACAGCCGTCTATG
TCGCGAAAGGTGTACATCAATCCGAATTTTCAGCTGCAAGGTCAAACGGC
GCATCAGCTGCCGTTCCAAGTGCCCTTCCAGGCGTTCCAGGCGCCACTGC
AGCCTCAGCCCGCGATCCATATCAATCCGCACTTTCTGAATCGCCAGCGG
GCCATGTACGACCAATACCAGCGGGAGCAGCAGGAGCAGCTTATGATGCA
ACAAGTTTCCGCCTCGCACTATCGACTGGATCCAACGATACACCTACTGG
CGACTCCACCTCCTCCGCCCGCCAAGATCATCAGCAAAGTGAGCACGTGT
CTCGTGCGCAAGCCATCAGTGGTGGCAAGTGGTCCGGCGGTGAAGCTCGC
TGCTTCAGTACCTGTGCCCACTGTTTCCAGCCTGGTGCAGCCTCCATTGG
TAAGCATTTCCAAGCGGAAAATTGTGAGGCAAGGAGCATTGAAAGCAGCG
CCAGCGGTTGCTGCCCTCCATCCTCCTCCACCTGCTAAACGCACTAGGTA
CAAATTAGTGCGTTCCATATCACTTACCTGCACACCGCTGGTCAAAAAGC
GTCGTCCTCTACGCGAGTTTGTGGGCCAGTACGCCCTGAGACGCACCAAT
GAAGCGCAGCCCAACAGAAAACTGAGCTCCAAGCCGCAGGCGCTGAAGCT
GGGCGTTAACAAATCCCTGAGCATGGTCAGCATACACGGTGTGATGTACA
AGATGATATCGAAGACAAATAACCAAGCTGGATGCCAGTTCCTCCGCTAG
GGTAGCCAATCGGAGAGTCCCAGGACCTTGCAGCGTACCTTGTCCGGCAG
AACGCTCTTCGTCAGCGGCATAAGTTCATTTTAGATCCTTCCGGCTGCCG
CCTGAACAGAGTTTCAACTCATCAACTGGGGCTACCAGAGAGCGTAAATC
GTACATCCTGGAGGCATCGATATTGGCGGCTTACTACGTGCTCGCCAAAG
GACTGATGTCTTTGTTCGCACCAGTATTCTCGGGCGCGAGCCCTTATTCA
CGCCAACAGAAAAACCTGGAGTT
FMO08153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZC3H3-RA | 2042 | CG6694-RA | 116..1199 | 5..1068 | 4720 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8508977..8509648 | 676..5 | 3345 | 99.9 | Minus |
| 3L | 28110227 | 3L | 8508614..8508880 | 936..675 | 1060 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:58 has no hits.
FMO08153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:13 Download gff for
FMO08153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6694-RA | 97..1154 | 1..1043 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:43 Download gff for
FMO08153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZC3H3-RA | 113..1170 | 1..1043 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:09 Download gff for
FMO08153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZC3H3-RA | 113..1170 | 1..1043 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:09 Download gff for
FMO08153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8508496..8508878 | 677..1043 | 93 | <- | Minus |
| 3L | 8508977..8509651 | 1..676 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:43 Download gff for
FMO08153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8501596..8501978 | 677..1043 | 93 | <- | Minus |
| arm_3L | 8502077..8502751 | 1..676 | 99 | | Minus |
