FMO08154.5prime Sequence
1103 bp (976 high quality bases) assembled on 2010-03-10
> FMO08154.5prime
CAGTCGACATGAGGTTTATTTTACTATCCCTGCTGTTGGCATCCTTCTGC
CTCTGGGAGGCGGTTCACACTTGTGCCAGCATCGAGCAGCGCTACAAGTT
TCCCAATAGCAATGTCTACGTGCGACTTAGGAGAGGTGATAAGTTGCAGT
ATGAGCTAATGAAGGGCGAGAAGTCCCTGCAGACGGTGACCTTCGACAAC
TTTGACAGCAGCGCCAATCTGGTGGAGACGAGCAGTGGTAGCTACCAGCT
TACCGATGGCCAATCCACCGTGGAGTTCACCCTGGTCAAAAGCGGAGTGG
TTGCCGGCACAGGCAGTGAGATAACCCATGTGAAAGTATCCCGAGATCAG
GTGCTGCAAGGCACCCAACCCAGGGATTGCGTCCCCCTGAAGACCGGATC
GACGCACTGGTTCAGTGGTCCGGAGCAGAAGCAACACTACTGGCCAGTGG
AGCGACAGAGGCATAGTAACTATTCCTACCTGCCAAAGGAGCTGGATAAC
TTTGGTGTGGGTGAGCGATATTGGTTGAACGGCGACGGAGTCTTTTTGTA
CGTGGAGAGCAACACTCCTCTGTTTATTGATCAGAATAGTGCTGCCTATC
CTGACCAGCTGTGTCTGAGTGCTATTAGTGCTCTACCCTATGATCCTCGG
GTGACCTCTGCCAAATTCGTTTACCACGTAGCTGTGGCCAAGGATGCCAA
GGCGGCGCACCGGTATGCCGTTAAAACGTTCCTCGGCCAACCCACAGGCT
ATCCCGATGAGCGAATGGTCATGCATCCTGTGTGGTCCACATGGGCTCTC
TACAGGCTGAGGTATCCGACGATGTGGTTCGTGACTTCGCCAAGCAGATT
CTGGATAATGGGTTCACAACAGCCAGCTGGAAATCGACGATGATTGGGAG
GATTGCTATGGAGCATGACCTTCAGGAAGAACAGTTCCCCGATAGCAAGA
CCCTGACTGATGACCTCACGGCTTTGGGTTCGTGTGACCCTGTGAATTCA
TTCATTCTTAACAACCACTGCCCAGCATTACGAATGAAACTAGTCTAGTA
CCTGGGGCCGATCCAAGGAAGTCTCCACCCAATGGTGGAACACAGCAGAT
GCA
FMO08154.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tobi-RA | 2104 | CG11909-RA | 36..1083 | 9..1047 | 4875 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25345862..25346886 | 1026..9 | 4720 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:40:19 has no hits.
FMO08154.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:15 Download gff for
FMO08154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11909-RA | 20..1064 | 1..1038 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:08 Download gff for
FMO08154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tobi-RA | 29..1073 | 1..1038 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:24 Download gff for
FMO08154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tobi-RA | 29..1073 | 1..1038 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:24 Download gff for
FMO08154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25345849..25346893 | 1..1038 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:08 Download gff for
FMO08154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21171571..21172615 | 1..1038 | 98 | | Minus |
