FMO08155.5prime Sequence
1086 bp (931 high quality bases) assembled on 2010-03-10
> FMO08155.5prime
CAGTCGACATGAGCGAGACCATAAACACCGCGGCTCAGTTCCCGAGCTTC
GAGAAGCCGACCGTGCAGTTCAATGAAAAGGGCTGGGGTCCCTGCGAGCT
GCCCGATACGTTCAAGGATGTGCCGTACCAGCCGTTCAGCAAGAACGATC
GTCTGGGCAAGATCTGCGACTGGACGAATACGTCGAACAACGACAAGAAG
TACCAGAACAAGTATGCCTCCAGCTTTGGCACGGGCATTCAGTACTCGTA
CTACCATGAGGAGGACGAGACAACCTTCCACCTGGTGGACACGGCCCGCG
TCCAGAAGCCGCCGCACCAGCGCGGCCGGTTCCGCAACATGAGGAATTCG
CGTTCCGGTCGTGGCAGGAATGCCCGCGGTGGCCTTAATACTCACGGCAT
GACGACGCTCAGCGGCAAGAATGTAAAGGCCCGCGATCCGCGCCATGGTC
GCGGCATGGGCAAGAAGTTCGGTCATCGCGGACCACCACCAAAGATGCGC
GAATCTTCGGTGGCCGTCCGCGCCGATTGGGCATCCATCGAGGAGATGGA
CTTCCCGCGACTCATCAAGCTGTCGCTGCCCAACATCAAGGAGGGCGTCG
ATATTGTCACCTGCGGCACGTTGGAGTACTACGACAAGACCTACGACCGC
ATCAATGTGAAGAACGAGAAGCCGCTGCAGAAGATCGATCGCATCGTGCA
TACGGTGACCACCACAGACGATCCCGTCATCCGGCGTTTGTCTAAGACCG
TCGGCAATGTCTTCGCCACGGACGCCATCCTGCCACCATCATGTGCTCTA
CGCGATCGAACTATTCCTGGGATATTGTCATCGAGAAGTTGGCGACCAGG
TGTTCATGGACAAGCGTGACCACTCCGAGTTCGATCTGTTGACCGTGAAC
GAAAACACGTGTGAAACCACCGAACGACGACAACAGTTCTTGGACTCCCC
TCCGCACCTGCCATCGAGGGTACTTTCATTATCACACTTATTCCGCAGTG
CTTAGAAGTGAGACCGACCCAATTAAAGTTTAAGAAAGCATCCTCTCTCT
ACGAGAAGAAATTCCAATCCCCCCGGGGCTACCCTC
FMO08155.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-3p66-RB | 2012 | CG10161-RB | 149..1128 | 5..981 | 4525 | 97.9 | Plus |
| CG4810-RA | 2232 | CG4810-RA | 573..891 | 525..842 | 250 | 72.5 | Plus |
| CG4810-RA | 2232 | CG4810-RA | 111..313 | 81..292 | 225 | 75.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23680512..23681142 | 208..837 | 3105 | 99.8 | Plus |
| 3R | 32079331 | 3R | 23680187..23680389 | 5..207 | 1000 | 99.5 | Plus |
| 3R | 32079331 | 3R | 23681216..23681357 | 841..981 | 325 | 86.7 | Plus |
| 3R | 32079331 | 3R | 12194121..12194439 | 842..525 | 225 | 72.1 | Minus |
| 3R | 32079331 | 3R | 12194813..12194872 | 175..116 | 210 | 90 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:09:09 has no hits.
FMO08155.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:16 Download gff for
FMO08155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-3p66-RB | 141..1062 | 1..923 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:53 Download gff for
FMO08155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-3p66-RB | 147..1068 | 1..923 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:32 Download gff for
FMO08155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-3p66-RB | 147..1068 | 1..923 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:32 Download gff for
FMO08155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23680185..23680389 | 1..207 | 98 | -> | Plus |
| 3R | 23680512..23681147 | 208..841 | 99 | -> | Plus |
| 3R | 23681217..23681274 | 842..899 | 96 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:53 Download gff for
FMO08155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19505907..19506111 | 1..207 | 98 | -> | Plus |
| arm_3R | 19506234..19506869 | 208..841 | 99 | -> | Plus |
| arm_3R | 19506939..19506996 | 842..899 | 96 | <- | Plus |
