FMO08157.5prime Sequence
1049 bp (927 high quality bases) assembled on 2010-03-10
> FMO08157.5prime
CAGTCGACATGGAATTCTACGATGGCGACCTCAAAGATATATGGGACTCC
GACTTAGATCCGGAATCCTTGAAAATCAGCCCCGATCACGATATGCACGA
CTGGCTGTTCGATCGGGACGTCAAAGATCCCACCGTCATACTCAACGACA
AGCTCATCTCGGATGCCCTGCTCAATGGCACACAGCCGATCAAGACGGAG
CACTCCTACAGTCTCAGCAGCGACGTTGACTCCCTGCCCGATTCACCAAA
AAGCCTCCAGGCCAAGATCGAGGACATGGACGACGAGTGCTTTCCCGCCA
TTTCACCGAAGACGGCGACCAATGGGCGCGTGACCATCGATCCCAAGTAC
CTCACCTTCCACGTCCCGCCCACGCACGCCACGCCCATCAGCCGGCTGAG
CAGCAATCCCGCCCTAAACACCTCCGTCGCGGATCTAACACGATCCTCCG
GCCTGCAGAGCCTGCAGGCGCACCAGCCACACCACGGATCCGGCTCGAGC
CACGTGGTGGTGGCCAATCTGGAGCACTTTCAACTACCTCAGCACCTATA
CGACAACGACTGCAGCTCCTCGGTGTCGTCGTTGCGGGATGGCAGCATGT
CGCCGGACATTTGCTCCGACATCGAGATCGACGAGTCGGCCATCAAGGAT
GAGCCCATGTCGCCGGACTCCAGCTGCCCCGCCAGTCCCACTTCTCAAGC
GAGCAGCTCGCAGCACCAGCTCAGCCTTAATCTGGCCCACCTGCAGTCGG
AAATGCTATTCGAGCCAAAGCACTGTGGCCTCCTGCTAACCGCCAGCAGC
TACAGCAACACAGCCTCATAAAGTCTCAGCAGCGCCAGCAGCAAATCCTT
GGCCAGGACATCTACTGATGGCCAAAATGGAGATCAAGAGCGAGAAACAG
AAGCACCAGCATACTCGGACAAATCGCATGCCCCGGCTATGGAATCCCGC
TGACGCCACCATCCTCTCTGCCCCTGTATGATTCGAAGTGAACTTATGAC
CGGAACACTGGTTTGCGCCATTGCTGCCCAAGCCACGCGGTCCCTCCTC
FMO08157.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebA-RB | 4498 | CG7450-RB | 1007..2035 | 8..1031 | 4735 | 97.8 | Plus |
| CrebA-RA | 3189 | CG7450-RA | 1007..2035 | 8..1031 | 4735 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15549548..15550045 | 273..770 | 2490 | 100 | Plus |
| 3L | 28110227 | 3L | 15547875..15548086 | 62..273 | 1060 | 100 | Plus |
| 3L | 28110227 | 3L | 15550145..15550412 | 769..1031 | 760 | 90.7 | Plus |
| 3L | 28110227 | 3L | 15536401..15536456 | 8..63 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:34:14 has no hits.
FMO08157.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:17 Download gff for
FMO08157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebA-RB | 981..1968 | 1..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:15 Download gff for
FMO08157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebA-RA | 1000..1987 | 1..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:04 Download gff for
FMO08157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebA-RA | 1000..1987 | 1..984 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:04 Download gff for
FMO08157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15547876..15548086 | 63..273 | 100 | -> | Plus |
| 3L | 15536394..15536455 | 1..62 | 93 | -> | Plus |
| 3L | 15549549..15550045 | 274..770 | 100 | -> | Plus |
| 3L | 15550147..15550403 | 771..1021 | 91 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:15 Download gff for
FMO08157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15529494..15529555 | 1..62 | 93 | -> | Plus |
| arm_3L | 15540976..15541186 | 63..273 | 100 | -> | Plus |
| arm_3L | 15542649..15543145 | 274..770 | 100 | -> | Plus |
| arm_3L | 15543247..15543503 | 771..1021 | 91 | -> | Plus |
