FMO08166.5prime Sequence
1092 bp (985 high quality bases) assembled on 2010-03-10
> FMO08166.5prime
CAGTCGACATGTCCAATCAGGCACCCTGGCCCGTTCGCAAGGGCATCTTC
CGCTCGAGCGGTCAGTCGGATTTCACGCCAACCCGATCGCCTAGTCCCAT
TGTGGAGATGCCATTATCCCCGCCGCCGGTGGCCACGCCCTCGAATAGAT
TTGGAATCAATTCACCGCTCTCCCCACCGCCGCAGCCTATTCAAGTGGTG
GCGGGTTCAACGACAGCCACTACCATGTCCACTGCGTCCGCTGCCAGAGT
GTCTGGTGCAGCTGCCTCCACTTCATCCTCGTCCTCCTCTTCTTCGTCGT
CGCAGTGCTCGTCGCAAACCTCGTCGAGTTCTAGTTCGCACACCAGAGTA
CGTAAAAGTTCTAACCCGCCCCCACAGCCAATTACCAGTTGTCCACTGTC
GCCACCACCACCACCACCACCACAGCAACAACAACAACTACCACAACAAC
TGCCACCTCCAACGCCCATCAACAACACCAACCACTCAGCAATTACAACA
CCCAATCACAACAATAACCACAACTGCAATCAAATGAGAAATGTACGCGA
AATTCCCATTGAGGTGGAGCAGAGCAAGGAAGCCCTCTCACTCCGCACCG
GCGACATCACACAGCAGGCGAGCAACAATGTGGCGGCCTCCAGTATTACG
GTGCAAAGTGAGAATTTCTCCGCGGACAAGAAGGCGATATCCCAGTCGCA
GCAATCGCAGACGATGACCTCCAACGGGATCATCAGTCAGGAGAAACATG
TATCCTCCGCCTCGCAGCCAACTACTCGATGTCGCACAAGGGCGTTTCCA
GTACCGGCAGTAGCATGATCACCAGCTCCTCGCAAATGTCCGCGATGAAT
GGCCAGATGCTGAAGCTCGCCGATCTCAAGTTGGATGACCTCAAGTCGCT
GACAGCTGGCAGTGGGCAGCAGGAGATCGAGCAGACCATCAACAGTATCA
TATGCTGACCTCAATAGTGTAGCTCCCCTGCAAGAAGAATGACCGAGATG
GTAGTGCCTTAACGTCCACGATGGTTGGTGGCAGAAGTCTCAATACCTGG
AGAAAATTAACGAGTCATTCCTCGAGCTTGGCAGTCCACACA
FMO08166.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ect4-RE | 4907 | CG43119-RE | 354..1442 | 9..1092 | 5015 | 98 | Plus |
| Ect4-RJ | 3837 | CG43119-RJ | 1120..1641 | 576..1092 | 2180 | 95.8 | Plus |
| Ect4-RI | 6741 | CG43119-RI | 3113..3634 | 576..1092 | 2180 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8101992..8102562 | 9..579 | 2855 | 100 | Plus |
| 3L | 28110227 | 3L | 8102891..8103399 | 577..1081 | 1920 | 95.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:09:16 has no hits.
FMO08166.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:25 Download gff for
FMO08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RE | 335..1422 | 9..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:54 Download gff for
FMO08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RE | 354..1441 | 9..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:36 Download gff for
FMO08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RE | 354..1441 | 9..1091 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:36 Download gff for
FMO08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8101992..8102561 | 9..578 | 100 | -> | Plus |
| 3L | 8102893..8103410 | 579..1091 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:54 Download gff for
FMO08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8095092..8095661 | 9..578 | 100 | -> | Plus |
| arm_3L | 8095993..8096510 | 579..1091 | 95 | | Plus |
