FMO08167.5prime Sequence
976 bp (976 high quality bases) assembled on 2010-03-10
> FMO08167.5prime
CAGTCGACATGGTTAGGGAGAACAAGGCAGCGTGGAAGGCTCAGTACTTC
ATCAAGGTTGTGGAACTGTTCGATGAGTTCCCAAAGTGCTTCATCGTGGG
CGCCGACAACGTGGGCTCCAAGCAGATGCAGAACATCCGTACCAGCCTGC
GTGGACTGGCCGTCGTGCTTATGGGCAAGAACACCATGATGCGCAAGGCC
ATCCGCGGTCATCTGGAGAACAACCCGCAGCTGGAGAAGCTGCTACCCCA
CATCAAGGGCAACGTGGGATTCGTGTTCACCAAGGGCGATCTCGCCGAGG
TGCGCGACAAGCTGCTGGAGTCCAAGGTGCGCGCCCCCGCCCGTCCCGGC
GCTATTGCCCCTCTGCACGTCATCATCCCGGCGCAGAACACCGGCTTGGG
ACCCGAGAAGACCAGTTTCTTCCAGGCCCTGTCCATCCCGACCAAAATTT
CCAAGGGAACAATTGAAATCATCAACGATGTGCCCATCCTGAAGCCTGGC
GACAAGGTCGGCGCCTCCGAGGCGACACTGCTCAACATGTTGAACATCTC
GCCCTTCTCGTACGGTCTGATTGTCAACCAGGTCTACGACTCCGGCTCGA
TCTTTTCGCCGGAGATCCTGGACATCAAGCCCGAGGATCTGCGCGCCAAG
TTCCAACAGGGAGTGGCCAACTTGGCCGCCGTTTGTTTGTCCGTGGGCTA
CCCCACCATCGCCTCGGCCCCGCACAGCATTGCCAACGGATTCAAGAATC
TGCTGGCCATTGCTGCCACCACCGAGGTGGAGTTCAAGGAGGCGACCACC
ATCAAGGAGTACATCAAGGACCCCAGCAAGTTCGCCGCAGCTGCTTCGGC
TTCGGCTGCCCCCGCGGCCGGCGGAGCTACCGAGAAGAAGAGGAGGCCAA
GAAGCTCGAGTCCGAATCAGAGGAGGAGGACGATGATATGGGTTTCGGTC
TGTTCGACGCAAGCTTTCTAGACCAT
FMO08167.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpLP0-RB | 1328 | CG7490-RB | 203..1153 | 9..958 | 4715 | 99.8 | Plus |
| RpLP0-RA | 1211 | CG7490-RA | 86..1036 | 9..958 | 4715 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22076415..22077312 | 62..958 | 4425 | 99.8 | Plus |
| 3L | 28110227 | 3L | 22076288..22076342 | 9..63 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:37:18 has no hits.
FMO08167.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:32:59 Download gff for
FMO08167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-RA | 128..1092 | 1..965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:16 Download gff for
FMO08167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-RA | 78..1042 | 1..965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:05 Download gff for
FMO08167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-RA | 78..1042 | 1..965 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:05 Download gff for
FMO08167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22076416..22077318 | 63..965 | 99 | | Plus |
| 3L | 22076280..22076341 | 1..62 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:16 Download gff for
FMO08167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22069380..22069441 | 1..62 | 93 | -> | Plus |
| arm_3L | 22069516..22070418 | 63..965 | 99 | | Plus |
