FMO08174.5prime Sequence
440 bp (440 high quality bases) assembled on 2010-03-10
> FMO08174.5prime
CAGTCGACATGTGCCAACAAGTCGTTGTGGTCGCCAACACCAACAACAAG
ATGAAGACCAGCTACAGCATCAAGCAGGTCCTGAAGACGCTCTTCAAGAA
GCAACAGAAGCAGCAGCAGAAGCCTCAGGGATCTCTGGAATCGCTAGAAT
CCGTCGACAATCTGCGCAACGCCCAGGTTGAGGAGGCCTACTATGCCGAG
ATCGATGAGAACGCCGCCAACGAGAAGCTGGCCCAATTGGCTCACTCTCA
GGAGTTCGAGATTGTCGAGGAGCAGGAGGACGAGGAGGATGTCTATGTCC
CAGTTCGCTTCGCTCGCACCACCGCCGGCACCTTCTTCTGGACCACCAAC
CTTCAGCCAGTCGCCAGCGTTGAGCCCGCCATGTGCTACTCCATGCAATT
CCAGGATCGTTGGGCCCAGGCTGCAAGCTTTCTAGACCAT
FMO08174.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)malpha-BFM-RA | 676 | CG8337-RA | 71..484 | 9..422 | 2055 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26010963..26011376 | 9..422 | 2055 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 20:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6785..6883 | 35..128 | 131 | 63.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1070..1101 | 96..127 | 115 | 84.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2389 | 95..148 | 105 | 68.5 | Plus |
FMO08174.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:31:26 Download gff for
FMO08174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| malpha-RA | 1..417 | 9..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:49 Download gff for
FMO08174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)malpha-BFM-RA | 71..488 | 9..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:16 Download gff for
FMO08174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)malpha-BFM-RA | 71..488 | 9..427 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:16 Download gff for
FMO08174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26010963..26011375 | 9..421 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:49 Download gff for
FMO08174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21836685..21837097 | 9..421 | 99 | -> | Plus |
