FMO08177.5prime Sequence
1174 bp (1035 high quality bases) assembled on 2010-03-10
> FMO08177.5prime
CAGTCGACATGCCGGAGTTCGTGAGAGTGGCAATTAACGAAAGCCTTTGG
GAGTTCCCGGATATATACGAGTTCGTTCGTTTTCTGGGTGGCGGTTCCTT
TGGCCAGGTGGCTAAGGTGAGACTACGAGGCACTGAAAATTACTTCGCTA
TGAAAAGGCTTATGCGCCCATTCGAGAGGGAGGAGGATGCTAAGGGTACC
TATCGCGAGATCCGTCTGCTGAAGCACATGAATCATCGAAATGTTATCAG
CCTGCTGAACGTCTTCCATCCACCAGCGCACAACATGATGGAATTTCAGC
AGGTTTATTTGGTGACTCACCTGATGGACGCGGATTTGCACAGGTACTCG
CGTTCGAAAAGGATGAGCGATCAAGAGATTAGGATAATCCTTTACCAAAT
ACTGCGGGGACTGAAGTACATACATAGTGCCGGGGTTGTTCATCGAGACT
TAAAGCCCTGCAATATCGCAGTTAATGGAAATAGCGAGGTGCGCATACTT
GACTTCGGTTTATCCCGTATGTGCGCAGACAAAATGACGGACCATGTTGG
AACTATGTGGTATCTAGCTCCGGAAATTATCTTTTTAAGGGGTCAATACA
CAAAGGCAATTGACGTGTGGTCGGTTGGTTGCATTCTGGCGGAACTTATC
ACGGATCGTGTCCTGTTTCGCGGTGAAAACTATGTAAGCCAAATACGATG
TCTGATTAACATAATGGGTACTCCGACGAGGGAGTTTATCACCGGGATAA
GCATGGAACGTTCGCGTAATTACCTGGAGGGGTACCCGTTACGACAAAGG
TGCGATTTTCATCACCTGTTTATGGGTTACGATGTCCAGGCCATCGATTT
GATGGAAAAAATGCTCGAAATGGTACCCGAAAAACGTATCACAGCTGCGG
AAGCAATGCTCCATCCATACCTTCGGGATCTTATTGAGCCACACCATCAT
GCCGAAGACCCGCACCAGTCTATGATCAGACTCGAAACATGGTACTGCCT
GTAAATGCTGGAAGAACTGTTCCCACGAAATCGGAACTTCGACCTGACCA
CTTGATTTGCATTTGCAAGCTTCTAAACATTCGTTGGCCGGGGCCAGGTA
TGGTCTAATCTAATCTAATCTATCTATCCAACTAGCTAGGAATCTGGCCT
GATAGCTGATCCATAAAACGCCGG
FMO08177.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:55:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p38c-RA | 1184 | CG33338-RA | 22..1088 | 9..1064 | 5045 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:55:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24149182..24150182 | 1005..9 | 4825 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:55:13 has no hits.
FMO08177.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:42:05 Download gff for
FMO08177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38c-RA | 1..1071 | 9..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:39 Download gff for
FMO08177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38c-RA | 18..1092 | 1..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:06 Download gff for
FMO08177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38c-RA | 18..1092 | 1..1068 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:06 Download gff for
FMO08177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24149112..24150186 | 1..1068 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:39 Download gff for
FMO08177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19974834..19975908 | 1..1068 | 98 | | Minus |
