FMO08183.5prime Sequence
1073 bp (957 high quality bases) assembled on 2010-03-10
> FMO08183.5prime
CAGTCGACATGTCCACCGTGAGCGACCCCAACAGTAGCAATCCGCCGGAG
AGTGCGGGGAACATTCGGCCGGAGCCCATTTTCCGGGAAATCAATGCGGA
GCAGACCGACGAGATAGTGGAGGTCGAATCCGCCTGCATGAACTGCTTCG
AAACGGGAGTCACTCGGCTGCTGCCCACCAAGATACCCTTTTTTCGCGAG
GTGGTGCTCATGTCCTTCAAGTGCGACCACTGCGGCCACATCAACAACGA
GATGCAGTCGGCATCGGAGATCCAAAAGTCCGGCATTCGCATCGAACTGC
GAGTGCAATCCGTGGCTGATCTCAATCGGCGCGTGGTGCGCTCGGATAAC
TCCAGCATCAGCATACCGGAGATCGAGCTAGAGATTCCGGTGCAGTCGCA
GAAGGGCGAGGTGACCACCGTCGAAGGCATCATCGAGCGGACGATAGCCG
GCTTGTCGCAGGATCAGGAGAAGCGGCGCATCGATCATCCGGAGACAGCT
GCTTCAATTGAAAAGTACATCGAGCGATTGCACCGCCTAAAGGAGGTGAC
AACACCCTTTCAAGTGCTTCTCGAGGACATATCCGGCAATAGTTTCATCG
AGAATCCCCTGGCACCTGCCGCCGATCCGCAGCTAAAGACTTCGTACTTC
ACACGCAGCCAGCAGCAGAACGAGCAATTGGGGCCTGTACGAGCAGAATC
ACGAGGAGCAGCACTTGTTGAAGCCGATTGCCGAGGACTCGTGGCCCATT
GAGAATCTGCACGGCGAAGTGCTTCAGTTCCCCACCAATTGTCCCAGCTG
CCAGGCGCCCTGCGAGACGAACATGAAGCTGACAAACATACCGCACTTCA
AGGAGTGTGATCATGGCCACCGTTTGCGTGCCTGTGGCCACAGACGACGA
GTGAAGTCCGGCGCGGAGTGAGGCGCAGGGTGTACGCTTCCGCGTCAGAT
GCCAGCAGGAGGATCTGACGCGTGATGTCTCCAGTCGAAACTTGACACAT
GTCTATCCGAACTGGACTCATGGTGAGTCGCATGCTCTGTGGCGAGGTAA
TCACACCGTGGAAAGTCTAGTGG
FMO08183.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zpr1-RA | 1853 | CG9060-RA | 116..1165 | 8..1041 | 4640 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9161301..9161975 | 682..8 | 3375 | 100 | Minus |
| X | 23542271 | X | 9160880..9161188 | 979..682 | 1020 | 95.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:04:38 has no hits.
FMO08183.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:03 Download gff for
FMO08183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zpr1-RA | 58..1065 | 1..994 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:59 Download gff for
FMO08183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zpr1-RA | 107..1114 | 1..994 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:27 Download gff for
FMO08183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zpr1-RA | 107..1114 | 1..994 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:27 Download gff for
FMO08183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9160863..9161187 | 682..994 | 94 | <- | Minus |
| X | 9161302..9161984 | 1..681 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:59 Download gff for
FMO08183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9054896..9055220 | 682..994 | 94 | <- | Minus |
| arm_X | 9055335..9056017 | 1..681 | 99 | | Minus |
