FMO08185.5prime Sequence
1124 bp (995 high quality bases) assembled on 2010-03-10
> FMO08185.5prime
CAGTCGACATGGGCGACTTCGATCTGAATGTGGACAGCTTGATACAGCGG
CTGCTGGAGAACTTTAAAAAACAAAAAGAGGCCGAAGAGCACGCCCAGAA
GCTGCTAATCGCTCAACAATTGGCCGCCGCCGGCGGAGCATCCGGCGCAT
CTGCCACATCGCCCACATCCAGCAGCAATTACTCGTCGATGGCGGCGGTG
GCCTCCTTTGGATCCGGATACGGATCGGGATCTGGTGCTGGTGCTCCTGG
TGCCGGCGCTGGCCCAGGATCCAGCCATGATCCGCTCGACGATCTCACCG
AACAGCAGCGCCGTCTGCTCCAGCAATACTCGATATCGCCGCCCAGCGAG
ACGATGATATCGGCCGATGGCGACCAGATCACCGTCCATCATCCGCGCGA
GGAGCCCAAGAAATCCAGATTGAAACTGCGCGATTTTTTCGTCGCCGAGT
TTGTGCGCAGCTGCCGAACGGGCAAACAGGTCCAGATGACGGAGGCGGAG
GTGCGTGGCCTCTGTCTCAAGTCGCGCGAGATCTTCTTGCAACAGCCCAT
CCTGCTGGAACTGGAGGCACCGCTGATCATCTGCGGCGACATCCACGGCC
AGTACACAGACCTGTTGCGCCTGTTCGAGTACGGCGGATTCCCTCCGGCT
GCCAACTACTTGTTCCTCGGCGACTACGTCGATCGGGGCAAGCAGTCCCT
GGAGACCATCTGTCTGCTGCTGGCCTACAAGATCAAATATCCGGAGAACT
TCTTCTTGTTGCGCGGCAACCACGAGTGCGCCAGTATTAATAGGATTTAC
GGCTTCTACGATGAGTGCAAGCGCCGATACAATGTCAAACTGTGGAAGAC
TTTCACAGATTGCTTCAACTGTCTGCCGGTAGCCGCCATTATTGACGAAA
AGATCTTCTGCTGCCACGGCGGCCTCAGTCCCGATCTTCAGGCATGAGCA
GATCCGTCGCCTAATGCGACCACAGATGTGCCGATACCGGGTACTGTGCG
ATCTTCTGGGGAGTGATCCCGACAAGATTTCAGTGGGGCGAAAATGATCG
CGGTGTGAGCTCACTTCGGTGTGATGTGTCCTCAGTTTGACGCCACGACT
GACTGACTGCTGCACATCAGGTTG
FMO08185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
flw-RA | 2524 | CG2096-RA | 553..1635 | 9..1078 | 5080 | 98.6 | Plus |
flw-RC | 3883 | CG2096-RC | 605..1242 | 454..1078 | 2855 | 97.6 | Plus |
flw-RB | 2131 | CG2096-RB | 605..1242 | 454..1078 | 2855 | 97.6 | Plus |
flw-RC | 3883 | CG2096-RC | 553..604 | 9..60 | 260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10388443..10388835 | 61..453 | 1965 | 100 | Plus |
X | 23542271 | X | 10406352..10406701 | 453..802 | 1750 | 100 | Plus |
3R | 32079331 | 3R | 12425158..12425574 | 935..519 | 1110 | 84.4 | Minus |
X | 23542271 | X | 15359804..15360262 | 938..480 | 1035 | 81.7 | Minus |
X | 23542271 | X | 10406761..10407031 | 801..1061 | 900 | 94.8 | Plus |
3R | 32079331 | 3R | 24518898..24519192 | 508..802 | 755 | 83.7 | Plus |
2R | 25286936 | 2R | 17955968..17956347 | 931..552 | 415 | 73.9 | Minus |
3R | 32079331 | 3R | 24519597..24519730 | 804..937 | 310 | 82.1 | Plus |
X | 23542271 | X | 10386512..10386563 | 9..60 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:18:09 has no hits.
FMO08185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:42:11 Download gff for
FMO08185.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
flw-RA | 580..1642 | 9..1061 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:58 Download gff for
FMO08185.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
flw-RA | 553..1615 | 9..1061 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:17 Download gff for
FMO08185.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
flw-RA | 553..1615 | 9..1061 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:17 Download gff for
FMO08185.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10386512..10386563 | 9..60 | 100 | -> | Plus |
X | 10388443..10388835 | 61..453 | 100 | -> | Plus |
X | 10406353..10406700 | 454..801 | 100 | -> | Plus |
X | 10406762..10407077 | 802..1097 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:58 Download gff for
FMO08185.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10300795..10301110 | 802..1097 | 92 | -> | Plus |
arm_X | 10280545..10280596 | 9..60 | 100 | -> | Plus |
arm_X | 10282476..10282868 | 61..453 | 100 | -> | Plus |
arm_X | 10300386..10300733 | 454..801 | 100 | -> | Plus |