FMO08193.5prime Sequence
1132 bp (991 high quality bases) assembled on 2010-03-10
> FMO08193.5prime
CAGTCGACATGGTCGACGAAAAGCTACCACCAAGCAAGGAACCGGCTGAA
CGGCCTCCAGACCAGACCACCCCCGGAAACGCGGCTACCCGATTCGGCTT
GGAGGATCACGAGGCCACTCAGCAGGATGCCCGGGTGAACACACTGCGCC
AAGCAGAAGAGCGACGTGGTTCAATGGTGCCTCCCGACAAGCGGGCGATG
TCCATGAAGATGTCGCAAGCGCGCTTACACACCATAAATGATCCGAATCG
AACTGGCACACATTCTGCTGAAGCGACGACACCACCGGCCAAGCCTGCGG
TCAACATTTCGTCGCGGAGTTCTTTGGTAAGAGGTGTGGCGCCAGATCTT
CCACCCAAGCCGCAGCGCCCCTCCGATAGCGAGGCCGATCTTGAATCGTC
CGATGTGGATAGACCATCGGCAAAAAGGAAATCGGAGAAAGCTCTAGCTG
ATGTGTCAACTTCGTCATCGGAGGAATCAGAGAAACGCGTCCCACCTGCT
GCTGCATCGGCGCCTCCTCCAGCACAAGCTGAGCCTCAGTGGAAATCAAT
TGATTTTGCAGCATCGGAAGCTGAGCCCATTGCCCCGCCGGCGCCTAGGC
CGGAGGATGTACCATTGCCCCCACCCATGATGTCGTCTTTGCCGACGGAT
GGAAGCCCCGACGATGTGCAGAGCATAAACAGCAAGTTGACCAATACCGA
CATCACTTTTCACCCATCCAAGGTATTCGCCTCGAAGGCAACTAACACTT
CGGGCATGCTCTACTCCGACGAGGAAAATGAGCCGGAGGAAGAGGAATTT
CCAAAGCTTCCGGATCAGTTTTCCGCCAGCGATCTGGACACTTTGTTCCT
GCTGGCTTGTCGGGAGGTGAAGAAGGCTGGTGCTATCGCTCTTGCGGAAA
ACAAAAAGAACCAGGAGTACACCACCAGAAGCACACGAATGATATCGTCA
CTCCCACCGACAACATTGTCGAGGAGTCTTCATAAGGCATCACCTCACGG
ATCTTGTCACCAATTATTGGCGAAGAGAAGAATTTCAAGTCCGGAGAGAC
TGGTTTGGTGACCCTGAACGAATGATCCACCTGGATAATCGATCCCATTG
ATGACCATGACCTTTGTTCACACACTTCGGTA
FMO08193.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9389-RA | 2043 | CG9389-RA | 155..1278 | 9..1127 | 5095 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21269454..21270426 | 980..9 | 4815 | 99.9 | Minus |
| 3L | 28110227 | 3L | 21269230..21269307 | 1121..1046 | 190 | 85.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:55 has no hits.
FMO08193.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:30:46 Download gff for
FMO08193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9389-RA | 148..1127 | 1..980 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:07 Download gff for
FMO08193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9389-RA | 148..1127 | 1..980 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:19 Download gff for
FMO08193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9389-RA | 148..1127 | 1..980 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:19 Download gff for
FMO08193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21269454..21270430 | 1..980 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:07 Download gff for
FMO08193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21262554..21263530 | 1..980 | 99 | | Minus |
