FMO08194.5prime Sequence
1102 bp (975 high quality bases) assembled on 2010-03-10
> FMO08194.5prime
CAGTCGACATGGCATTCCGCCAGTCGGAGCACGAGATGAGCGTCACCTCA
CTCGATTCAAGCGTCGAACTGAGATCGCGTTCGCCATCGCCGCAGGTCTT
CAATCCGCGCAAGCTCCGCTTCGCCGATGATGACTTTGACAAGGACACGC
CCGAGGGAGCGAGTCCGCAGCATCCCCTTCAGCAGCGGCCGAAGCTATCC
TCCGGTGAGGAGCAGCAGCTGGACAGTAAGATAGGCAAAGAAGGCGGCGA
CGGGGACGTGTCCATGTCGCCGCCATGCCAAAAGGTGCGGGCCCTGCGAC
TCTTTAGCACACCGGCCACTCCAAAGACCATCCTGCAGAAGTCGACGACG
CAGTGCAGCAACCATCTGTCGGCGGCAGCAGCGGCAGTGAATGCCTCCAG
GCGCAGCGACGACCTCTTCCGCCTGTCAGAGCGCCCGCGATCTCTGCCAC
TGCACAACCGCAAACTGCCCACCCAGGACACGGCAAATGTGAACCCCTTC
ACGCCAGATAGCCTCATGGCTCACAATAAGAAGCGCTGTCGCACGCAATT
CGGACGCGAAAACCTCAACCTGAACGTGAATGCTATGCAAAAGTATTTGC
TCAGTGATGCCTGCGACGACGATGTGACGGAGGAGGCGGGCGACTCGATG
CGCGAAATCCACCAGCAGGCACCCAAGCGGCTGGCCCTGCACGACACGAA
CATCAGTCGCTTCAAGCGGGAGTTCATGCGAGTCAACGTAATCGGCGTTG
GCGAGTTCGGTGTGGTGTTCCAATGCGTCAATCGACTAGATGGCTGCATA
TATGCGATTAAAAAGAGTAAGAAGCCGGTGTCAGGCAGTTCTTTCGAAAA
GAGAGCCCTGAACGAGGTCTGGGCCCATGCTGTATTGGGCAAGCACGATA
ACGTGTTAGATACTATTCCGCGTGGGCGGAGGACGATCATATGCTGATAC
AGAATGAATTCTGCGATGGTGCAGCTTGCACGCCGGCATCCAAGAACATG
GTTTGGGTGAAGCAGAGCTACGATGTTCTCATGCTGGATAGAAGGCCTAA
CCTTAATTCATCAATGACCTGAGGCCATGGACTGAAGCCGAACTTATCTC
CC
FMO08194.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wee1-RB | 2652 | CG4488-RB | 212..1302 | 9..1089 | 4980 | 97.7 | Plus |
| Wee1-RA | 2399 | CG4488-RA | 212..1302 | 9..1089 | 4980 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6913425..6913927 | 511..9 | 2515 | 100 | Minus |
| 2L | 23513712 | 2L | 6912945..6913281 | 847..511 | 1655 | 99.4 | Minus |
| 2L | 23513712 | 2L | 6912714..6912888 | 1020..848 | 700 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:13 has no hits.
FMO08194.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:42:09 Download gff for
FMO08194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wee-RA | 203..1250 | 1..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:29 Download gff for
FMO08194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wee-RA | 204..1251 | 1..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:51 Download gff for
FMO08194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wee1-RA | 204..1251 | 1..1042 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:51 Download gff for
FMO08194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6912945..6913281 | 511..847 | 99 | <- | Minus |
| 2L | 6912670..6912888 | 848..1060 | 92 | <- | Minus |
| 2L | 6913426..6913935 | 1..510 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:29 Download gff for
FMO08194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6912670..6912888 | 848..1060 | 92 | <- | Minus |
| arm_2L | 6912945..6913281 | 511..847 | 99 | <- | Minus |
| arm_2L | 6913426..6913935 | 1..510 | 99 | | Minus |
