FMO08201.5prime Sequence
873 bp (873 high quality bases) assembled on 2010-03-11
> FMO08201.5prime
CAGTCGGCATGCCCAAGGGTCGTGTTAGCAATGTGTGGCAGCACTACGAT
ATTAACGAGGAGTGCGAAAACTTTGCGATATGCCGTTATTGCGGCAACAA
TATATCGCGTGGTGGCATGGCCAGCAATTTGAAGGGCAACAATACGACCA
ATTTGTGGACGCATCTGCGGCACAAGCACAGGGACGAGGTGCTGGTCAGT
CCGGTGCAGCAACGTCCCCAGGCCCGGATGATCCCAATCATCAAGAAAGA
CAAAACCGTGCGGATTACCAAGGCCAAGACGCTGAGGGAGCCGCTGCGTG
TGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAATTATCTGGGCGAGGCG
GGCGCCCTGCCGCAAAAGTTGGAGGAGTACGAGCAGAACGATGAGATTAG
CGAGGACATTAAGGACATCATATACAGCGAGGATCCACTGTGCTATAGTC
CTATACACGTGATGGATGATGAGGGCCTGGATCAGCCTGAGAAGCAAGTG
ACCGTGCTAACCCATTCGACTTCACCAGCCGGTGGAAGTAGCAGGCCCAT
CGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGGCCTCCACGTCCTCCA
GCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTGGAGACGTCCATCGAA
CGGCTGACCGCTGTCAGCGAACAGCTCAGCTACATCATACAACAGAATCA
CGAGGAGCTCACCAAGGACGACGACTACTATTTTGCACTTAGCTTGGTGC
CCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATGTACGTGCGGTCCAAG
ATCCAGGATATACTGTTCAAGGAAAGTGAGGACTCAACGCTTGCCAAGGA
TGAGGCAAGCTTTTCTAGACCAT
FMO08201.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-RC | 1558 | CG10159-RC | 487..1332 | 9..854 | 4215 | 99.9 | Plus |
| BEAF-32-RB | 1173 | CG10159-RB | 102..947 | 9..854 | 4215 | 99.9 | Plus |
| BEAF-32-RA | 1192 | CG10159-RA | 361..966 | 249..854 | 3015 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14771798..14772404 | 248..854 | 3020 | 99.8 | Plus |
| 2R | 25286936 | 2R | 14771402..14771642 | 9..249 | 1205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:04:34 has no hits.
FMO08201.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:57 Download gff for
FMO08201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RB | 465..1315 | 9..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:10 Download gff for
FMO08201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RB | 102..952 | 9..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:47 Download gff for
FMO08201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RB | 102..952 | 9..860 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:47 Download gff for
FMO08201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14771402..14771642 | 9..249 | 100 | -> | Plus |
| 2R | 14771800..14772409 | 250..860 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:10 Download gff for
FMO08201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10658907..10659147 | 9..249 | 100 | -> | Plus |
| arm_2R | 10659305..10659914 | 250..860 | 99 | | Plus |
