FMO08206.5prime Sequence
1063 bp (956 high quality bases) assembled on 2010-03-11
> FMO08206.5prime
CAGTCGACATGTCCAACAACCTGCAGCCGCGTGTGGTGGACCTGGGCGTG
GCTTGCCTGGTCTGCCTGGCGGAGGAGCCCGAGGCCAGCTCGATCTATGG
CCACGACCCGGAGTCTCCTCATATGCTCATCCTGGACAAGATTCGCTGCT
GCACCAGCCTGCAGCTGGACAGCAGCCCGTCGCAGCTGCAGCGCTGGCCG
GACAAGATCTGCAAGCAGTGCCATCTGGAGCTGTCCGTCTCTTATCGCTT
TCACGAAAAGTGCACCGCTGTCCAGAAGCTATTTCGCTCCGCCAGCCGCT
CTACCTCGACCTCCGCCGTCTTCGCCGCCGCTGCTGCTGCTCCTCCTGCC
CCTATGCTGGTCGATAAGCAGCAGGAGCAGCTTAAGCTTGATCTGGAACA
GGCTCACGTTCGGCTGCCAGCAACACTGAAAATAAGGAGGCTCAACGTGG
AGCCCTGCTCTTCCAGTTCAGTAAGCGGTACAATAACTACCAGCACGGAG
CCCTCCGAGGATGTCAAGGAGGAGAAGACCGATTCACTATCCCTGATACC
AGACGGAGCGATGGTCCTATCCCTGAATGACTTTCAAGCGCAGGATTCTA
TTACTCAGCAGGCAGAAGAAAAGGACCCTAAAAAACAGCAGGATGAGGAT
GAGGGGCAGGCCAAGATGCTGGAACTGGATCCTTGGGATGACGAAAACAC
GCCGGAGCATCTGTACGAGATCGAGACTCCGCTCATCGAGGAGTCTGTGG
TGGCCAGTCCGCCGTTGCCGTTGCCGCCTACTCATCCCGCCAACCAGCAG
AAAAGCGCACCTACCGTCGCGTTTCGCCCAATGTGAAGCATGAAAACTGA
CGGCGACGTGGTACGATGATTTTAGGCCGGTCCACGACCAACGCGCAACT
GCGACGCTCGCAAAGATCTGCGATGTTTGCGTAATAATACAGTACAGCAC
GCGCTAAATGCCCACATGCGCGTCCAACCACGAGCGCCCATTATTCTGCA
GGTGTGCAGAGGCGTTCATCTCAACGTGGACTGCGACGCCCATGGCGTCA
TACCGGCAGAGCC
FMO08206.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-RA | 1945 | CG9215-RA | 107..1177 | 9..1057 | 4685 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15581795..15582768 | 970..9 | 4200 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:09:42 has no hits.
FMO08206.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:08 Download gff for
FMO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 100..1183 | 1..1063 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:13 Download gff for
FMO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 102..1185 | 1..1063 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:50 Download gff for
FMO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 102..1185 | 1..1063 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:50 Download gff for
FMO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15581690..15582772 | 1..1063 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:13 Download gff for
FMO08206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15475723..15476805 | 1..1063 | 96 | | Minus |
