FMO08209.5prime Sequence
575 bp (575 high quality bases) assembled on 2010-03-11
> FMO08209.5prime
CAGTCGACATGTCGAATCCGCAGGAAGAACTACTGCCGCCCAGCGCCGAG
GACGACGAGCTGACCCTGCCACGGGCCAGCATCAACAAGATCATCAAGGA
GCTGGTGCCCACGGTGCGGGTGGCCAACGAGAGTCGCGAGCTGATACTCA
ACTGCTGCTCAGAGTTCATTCATCTGATCAGTTCGGAGGCCAACGAGGTG
TGCAACATGCGCAACAAGAAGACGATAAACGCAGAGCACGTCCTGGAGGC
GTTGGAACGCTTGGGTTTTCACGACTACAAACAAGAGGCGGAGGCCGTTC
TGCACGACTGCAAGGAGGTGGCAGCCAAGCGAAGGCGCCAGAGCACGCGC
CTAGAGAACCTGGGCATTCCGGAGGAGGAGCTGCTGCGCCAGCAGCAGGA
GCTGTTCGCCAAGGCACGCGAGGAGCAGGCGCGCGAGGAGCAGCAGCAGT
GGATGAGCATGCAAGCGGCAGCAATGGTGCAGCGACCACCGCTGGCAGAC
GGCTCCGTTGCCAGCAAGCCAAGTGAGGATGACGATGACGATGACGACGA
CGACTACGCAAGCTTTCTAGACCAT
FMO08209.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NC2beta-RA | 726 | CG4185-RA | 105..654 | 8..557 | 2750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15007917..15008466 | 8..557 | 2750 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:17:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 375..604 | 331..558 | 154 | 56.8 | Plus |
FMO08209.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:05 Download gff for
FMO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NC2beta-RA | 91..648 | 1..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:41 Download gff for
FMO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NC2beta-RA | 97..654 | 1..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:57 Download gff for
FMO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NC2beta-RA | 97..654 | 1..557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:57 Download gff for
FMO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15007909..15008466 | 1..557 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:41 Download gff for
FMO08209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15007909..15008466 | 1..557 | 99 | | Plus |
