FMO08216.5prime Sequence
484 bp (374 high quality bases) assembled on 2010-03-11
> FMO08216.5prime
CAGTCGACATGGATCAGCTAATACAACAGCTGCAACAGGCAGCTGCTGCT
CGGGGACAAGTCCAACATCCCCATGGTTCATCCGCTTTGCAACTTTACGC
GGCAGCAGCGGCTGTCAACATGCAAGTGAGCGGCTGGTCATCCGTTCTCA
ACTTGTCCATGGATGCCCCAAATCCGGAAATTAGTCCCAATTCCGTAACC
AATTCGTCCTCCGTGTATATGATCCGCCAAATGGCGCTGATACAGCAAGC
CAGAGTGGCCGCCGCAGCAGTGGCAATGCAGCAGCAGCAGCAACAGCAAA
GGGATCTCAATCGGGAGCTTGGCATGGGATCCGCCACAGTGGAGCAGCGT
ATTAAGTTGGACTCAGTGGTCACCCACGCCACAACATCCACGCGGGGCTC
TAGCCCGGGATCAAACAGAATCCGCTTAACCATGAAGGGGCCGATTCCAA
TCGGGGGCAAAATGATTGGTACAAGTCCCCGAAA
FMO08216.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
OdsH-RA | 1289 | CG6352-RA | 58..527 | 9..483 | 2025 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17791067..17791449 | 9..396 | 1690 | 98.7 | Plus |
X | 23542271 | X | 17811691..17811753 | 406..468 | 210 | 88.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:50 has no hits.
FMO08216.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:11 Download gff for
FMO08216.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
OdsH-RA | 9..485 | 1..481 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:59 Download gff for
FMO08216.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
OdsH-RA | 49..525 | 1..481 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:12 Download gff for
FMO08216.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
OdsH-RA | 49..525 | 1..481 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:12 Download gff for
FMO08216.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17791058..17791448 | 1..395 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:59 Download gff for
FMO08216.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17685091..17685481 | 1..395 | 97 | -> | Plus |