FMO08218.5prime Sequence
1079 bp (966 high quality bases) assembled on 2010-03-11
> FMO08218.5prime
CAGTCGACATGTCCACCTTGGCCAGCACTCGACCGCCCCCGCTCAAGCTG
ACTATTCCTTCCTTAGAGGAGGCAGAGGACCACGCGCAGGAGAGGAGAGC
GGGCGGAGGTGGCCAGGAAGTAGGTAAAATGCATCCGGATTGCTTGCCCT
TGCCGCTTGTCCAGCCGGGCAACTCGCCCCAAGTGCGGGAGGAGGAGGAG
GACGAGCAGACGGAGTGCGAGGAGCAGCTGAACATAGAGGATGAAGAGGT
CGAGGAGGAGCACGATTTGGACCTGGAGGATCCGGCCAGCTGCTGCAGTG
AGAATAGTGTCTTGAGTGTGGGCCAGGAACAATCGGAAGCAGCACAGGCT
GCGCTATCCGCTCAAGCTCAGGCCAGGCAGAGGCTTTTGATCAGCCAAAT
CTATCGACCGTCGGCATTCAGCAGCACTGCTACCACTGTTTTGCCGCCCA
GCGAAGGTCCGCCCTTCTCACCCGAAGATCTCCTGCAACTGCCTCCCTCC
ACTGGAACCTTCCAGGAGGAGTTCCTGCGAAAGTCCCAGCTGTACGCCGA
GGAGCTGATGAAACAGCAGATGCATCTAATGGCCGCCGCCAGGGTGAACG
CTCTCACGGCAGCGGCGGCGGGAAAACAGCTGCAAATGGCAATGGCGGCG
GCGGCGGTTGCCACAGTGCCCAGCGGTCAGGATGCACTGGCTCAGCTGAC
GGCCACGGCATTGGGTCTGGGACCCGGTGGAGCGGTGCATCCCCATCAGC
AATTGCTACTGCAAAGGGATCAGGTCCACCACCATCATCACATGCAGAAT
CACCTGAATAACAATGAAAATCTGCACGAAAGGGCGCTCAAATTCAGCAT
AGACATATCCTGAAGCGGACTTTGGTTCCAGATTGCCCAGATTGTGCTTT
AAGTGCAATATCGGTGGTGCAGTGTAGTGGGAGCAGTACTGGCAGCAGTA
AAATTCTGGAATACATGCCACAGATCCTCCCTAAAGCGCCAGAAGTCGGA
AGCCACTGATCTGTCAAGTAACGCCCGCCGCACTTACCTGACTTCCCCAG
GCTCTGGCGAATATGCCGCCACGCACGAT
FMO08218.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| inv-RE | 4776 | CG17835-RE | 269..1311 | 9..1031 | 4665 | 97.6 | Plus |
| inv-RB | 2261 | CG17835-RB | 269..1311 | 9..1031 | 4665 | 97.6 | Plus |
| inv-RD | 3404 | CG17835-RD | 1412..2454 | 9..1031 | 4665 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11475976..11476927 | 9..953 | 4410 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:39:11 has no hits.
FMO08218.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:13 Download gff for
FMO08218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inv-RA | 1412..2378 | 9..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:25 Download gff for
FMO08218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inv-RD | 1412..2378 | 9..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:45 Download gff for
FMO08218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inv-RD | 1412..2378 | 9..970 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:45 Download gff for
FMO08218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11475976..11476936 | 9..961 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:25 Download gff for
FMO08218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7363481..7364441 | 9..961 | 99 | <- | Plus |
