FMO08222.5prime Sequence
1055 bp (920 high quality bases) assembled on 2010-03-11
> FMO08222.5prime
CAGTCGACATGGCAAGTGCGAGCACTGAAAACGGCGAGGAGCTGATGAAT
TACGGCAGCAATTCGGATTCGGAGGAGTCCGAGTACTCGGAGAACGAGGA
TACCCAAGTTTGCGACAAGGATTCACAACAGAACAGCAATGCCGATTCGG
GCTATCCACTGGACTCGCCCGAACTACAGGACTCCAAGACGACGGGGCAA
AAGGGACAGAACAAAAGCGGTAAAACTAGCATCGGTGCAGTGCATCCGAA
CTATGGATTCGGCAAACGCTGGTCCAAGTCCGAGGATGTGTTGCTCAAGC
AGCTGGTGGAGACGCACGGTGAGAACTGGGAGATTATCGGACCGCATTTC
AAGGATCGCCTGGAACAGCAAGTGCAGCAGCGTTGGGCCAAAGTCCTCAA
TCCGGAGCTAATCAAGGGCCCGTGGACGCGGGACGAGGACGACATGGTTA
TTAAGCTGGTGCGCAACTTCGGGCCCAAGAAATGGACACTAATTGCACGA
TATCTGAACGGACGAATTGGGAAACAGTGCCGCGAGAGATGGCACAACCA
CCTCAATCCGAATATCAAGAAAACGGCCTGGACCGAAAAGGAGGACGAGA
TTATCTACCAGGCTCACTTGGAGCTGGGCAACCAGTGGGCAAAGATTGCC
AAACGTCTGCCCGGACGCACCGATAACGCCATTAAAAACCATTGGAATTC
AACAATGCGTCGCAAATATGACGTCGAACGCAGATCGGTTAATGCATCTG
GTAGCGATTTGAAGAGTTCGCGAACCCATCTCATCACGCTGATCAAGTCC
GGTGCATCAGCAAGTGTATGAATAATATGCACATACAAGGATCTGGTGGT
GAGGCAGTTAATAAATCCGAAACGCCGATGCGCTTCGTTACTGCCGTGAA
AGTGTGATCTGGCACAGAATCACAGACGATCATCAAAGGGATCCATTCTG
CCACCTCAGTATGCAGCATCTCATTAGTGACATGCCCGCCAACACCGATC
CTATTGGAGCGTACCGCAAACATTCCGAAACTCACATCAGCGGATGTCCT
CAAGT
FMO08222.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Myb-RE | 2903 | CG9045-RE | 720..1775 | 9..1040 | 4645 | 97.4 | Plus |
| Myb-RD | 2865 | CG9045-RD | 657..1712 | 9..1040 | 4645 | 97.4 | Plus |
| Myb-RB | 2732 | CG9045-RB | 549..1604 | 9..1040 | 4645 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15856123..15857104 | 976..9 | 4235 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:34:32 has no hits.
FMO08222.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:06 Download gff for
FMO08222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myb-RD | 655..1710 | 9..1040 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:46 Download gff for
FMO08222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myb-RD | 655..1710 | 9..1040 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:54 Download gff for
FMO08222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myb-RB | 549..1604 | 9..1040 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:54 Download gff for
FMO08222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15856060..15857104 | 9..1030 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:46 Download gff for
FMO08222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15750093..15751137 | 9..1030 | 97 | | Minus |
