FMO08224.5prime Sequence
1006 bp (844 high quality bases) assembled on 2010-03-11
> FMO08224.5prime
CAGTCGACATGCAGAACTGGGAGACGACAGCCACGACCAACTACGAGCAG
CACAACGCCTGGTACAACAGCATGTTCGCGGCAAATATCAAACAGGAGCC
AGGTCATCATCTCGACGGGAATAGCGTGGCCAGCAGTCCGCGCCAATCGC
CCATTCCCTCGACCAATCACCTGGAACAGTTCCTCAAGCAGCAGCAGCAG
CAGCTTCAGCAGCAACCCATGGATACCCTGTGCGCCATGACCCCATCACC
CAGCCAAAACGATCAAAACAGCCTGCAGCATTACGATGCTAACTTGCAGC
AACAGTTGCTGCAGCAACAGCAGTACCAGCAGCATTTCCAGGCAGCCCAG
CAGCAACATCATCACCATCATGATCTGATGGGTGGATTCAATCCGCTGAC
GCCACCTGGTCTGCCCAATCCCATGCAGCACTTCTATGGCGGCAATCTGC
GACCCAGTCCGCAGCCCACGCCCACATCTGCCTCCACAATTGCGCCCGTT
GCAGTTGCCACTGGCAGCAGCGAGAAGTTGCAGGCACTAACACCACCCAT
GGATGTCACACCGCCTAAGTCGCCGGGCCAAGTCGAGTCAGTCGAATATT
GAGCCGGAGAAGGAGCACGATCAGATGTCGAACTCCAGCGAGGACATGAA
GTACATGGCCGAGTCCGAGGACGATGATACCAACATCCGGATGCCATCTA
CATTCGCACGGCAAGATGAAGAACTACAAGTGCAAGACCTGCGGCGTGTG
GCCATCACCAAAGTGGACTTCTGGGCGCACACCCGCACTCACATGAAACA
GACAGATCCTGCAGTGCCCGAAGTGCCCGTTCGTCACGAGTTCAAGCCCA
CTTGAGTACATATCCGGAAGCACAAGAACAAAGCCTTCAGTGCGACAATG
CAGCTACACGTGTTCAACAAATCATGCTAACTCGCACGCAGTCGACAGTT
CTTGGGTTCAGTACGTGTGCGGATTGGGAATACCCCACAGTATTGCCAAG
CTTCAA
FMO08224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hb-RA | 3338 | CG9786-RA | 164..1185 | 9..1006 | 4320 | 96.5 | Plus |
| hb-RB | 3181 | CG9786-RB | 516..1537 | 9..1006 | 4320 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8693226..8694154 | 923..9 | 3845 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:17:39 has no hits.
FMO08224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:08 Download gff for
FMO08224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hb-RA | 156..1138 | 1..964 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:44 Download gff for
FMO08224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hb-RB | 508..1490 | 1..964 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:01 Download gff for
FMO08224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hb-RB | 508..1490 | 1..964 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:01 Download gff for
FMO08224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8693180..8694161 | 1..964 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:44 Download gff for
FMO08224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4518902..4519883 | 1..964 | 96 | | Minus |
