FMO08225.5prime Sequence
1109 bp (963 high quality bases) assembled on 2010-03-11
> FMO08225.5prime
CAGTCGACATGGCCAGTGTTTTCGATGAGTCTCATGAACCGGGCCTATCC
ATTGCGTACATAATATACAAGTGCACCGGCTGGCAAGTTGAGAAGCACGA
TCCACTGTCCAACACCATATGCAAGTCCTGTCTGGAGGATGCGCAGAATG
CATTCGATATCATAGAAACGTACGAGAGAAGTCACCAGTTTTACCGCTTC
CTCAAGGATGTACGGGAGGAGGAGAGTGAAAATGATGGATCCGGATGCTC
AGAAGAAGTGGAGGCAGCTGAGAGGGATCTCCAGGATGGTGCCGACGACG
TCGATTCCGGCAATGAACCTGATATTAACGAATGTGATATCAAGGCCAAG
GAGAAACCAGGCTTTAGCTGTTCTCACTGCCCTAAATCTTTTCAAGTAAA
ATCAAATCTGAAGGTACACATGCGTTCACACACAGGAGAACGTCCCTTCA
CGTGTTCCCTCTGCCCCAAGTCCTTTGGCTATAGCTCTGGTCTTCAGAAT
CACATGCGAACCCACACAGGAGAACGACCCTTCCAGTGCTCGCATTGCCC
AAGGTCCTTTACAGCTGGGCACCACCTCAAGGCCCACATACAGATGCACG
AAAGAAGAGGATCGTTAAGGTGCCCATACTGCCAAAAGTGCTTTCTAACT
TCTTTAATTCTCAAGCAGCATTTGGCCACGCACACTGATGAAACGCAGTT
CAAGTGTTCCCAGTGCTCGAAGTCCTTTCAAGTCGAACATGAACTTTGGA
TGCACATGCGGGTGCACCAAGAACGCCTCTTTACTTGTGGCCATTGCTCA
AAGGACTTTGCGCTACATGCGTATCTCAAGCGACACCTGTCAAGGAACGC
GAGATGCTCTCAAGCTCAAAAGCATCTGCTCACAAACACTAGCACTCAAA
GGCACTTAAGTGTGGTAGTGCCCAAAACTTTACTGACCGTTCGGCTTTGT
CCACTCACTTGAAATCACACCCAAAAATAAGCATTGCTCGAAGTCCTTGC
AATCTCCAGATCTAAGCCGGCCTAGTACGACCAAAGAAAACGGTTATGTT
CACTTGCCAGAACTTTTCGCGAAATCGCTGTCTACACCTTGCAACCACAC
AGGAACTGG
FMO08225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Neu2-RA | 1308 | CG7204-RA | 157..1208 | 9..1045 | 4805 | 98 | Plus |
| Neu2-RB | 1126 | CG7204-RB | 157..1066 | 9..914 | 4445 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21489008..21490001 | 993..9 | 4530 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:41 has no hits.
FMO08225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:28 Download gff for
FMO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu2-RA | 1..1048 | 9..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:53 Download gff for
FMO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu2-RA | 157..1204 | 9..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:44 Download gff for
FMO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu2-RA | 157..1204 | 9..1041 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:44 Download gff for
FMO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21488954..21490001 | 9..1041 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:53 Download gff for
FMO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21482054..21483101 | 9..1041 | 98 | | Minus |
