FMO08226.5prime Sequence
1063 bp (947 high quality bases) assembled on 2010-03-11
> FMO08226.5prime
CAGTCGACATGTCGAGCGCGTCAAAGTCGACGCCGAGCGCTGCCAGCGGG
AGCTCCACGTCCGCAGCTGCCGCCGCCGCAGCCTCTGTCGCCTCAGGATC
CGCCTCGTCATCCGCCAACGTGCAGGAGTTCAAGATCCGCGTGCCCAAGA
TGCCCAAGAAGCACCATGTGATGCGGTTCAACGCCACGCTCAATGTGGAT
TTCGCGCAGTGGAGAAATGTGAAACTGGAGCGGGAAAACAACATGAAGGA
GTTCCGGGGCATGGAGGAGGATCAGCCCAAGTTTGGTGCTGGATCGGAGT
ACAACCGGGATCAGCGCGAGGAGGCGCGCCGCAAGAAGTTTGGCATTATA
GCGAGAAAGTACCGTCCAGAGGCACAGCCATGGATCCTTAAAGTGGGTGG
CAAGACTGGAAAGAAGTTCAAAGGCATCCGCGAGGGCGGCGTAGGCGAGA
ATGCAGCTTTCTATGTGTTCACCCATGCACCAGACGGCGCCATTGAGGCA
TACCCCTTGACCGAGTGGTACAACTTCCAGCCTATTCAGCGCTACAAATC
GCTGTCGGCGGAGGAGGCCGAACAGGAATTTGGTCGGCGCAAAAAGGTGA
TGAACTACTTCTCCCTTATGTTGCGAAAGCGTCTGCGCGGCGATGAGGAA
GAGGAGCAGGATCCGGAGGAGGCTAAGCTAATTAAGGCAGCCACCAAAAA
ATCCAAGGAGCTCAAGATCACTGACATGGATGAATGGATTGATTCCGAGG
ATGAGTCGGATTCGGAGGACGAGGAGGATAAAAAGAAGAAGGAGCAGGAA
GACAGCGACGATGGCAAGGCCAAGGGAAAGGGCAAGAAGGCGCAGACTGA
AAAGAAAAGAGGGATGTTGATGACGAGGCCTTCGAGAGTCGGACGATGGT
GACGAGGAGGCAGAGAATGGACTACGACACTCGCTCCCATTGAGACAACA
AATCCAAGGCAAGTGGGACATGACATGAAAGGCTGGGCCTAGAAATGCGC
TCCCCAGCTGCTTATCTCCGATGAAAGGGAGGATGTAGTGAAAATTCTGT
CTGATCCGGACAG
FMO08226.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIFalpha-RA | 1938 | CG10281-RA | 129..1171 | 8..1035 | 4570 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6380685..6381597 | 32..937 | 4195 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:44 has no hits.
FMO08226.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:30 Download gff for
FMO08226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIFalpha-RA | 129..1186 | 1..1044 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:46 Download gff for
FMO08226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIFalpha-RA | 121..1178 | 1..1044 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:04 Download gff for
FMO08226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIFalpha-RA | 121..1178 | 1..1044 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:04 Download gff for
FMO08226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6380686..6381590 | 33..930 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:46 Download gff for
FMO08226.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2206408..2207312 | 33..930 | 99 | == | Plus |
