FMO08234.5prime Sequence
1064 bp (891 high quality bases) assembled on 2010-03-11
> FMO08234.5prime
CAGTCGACATGGCCCTGCCAAGCAACTACAAGCAGATAGCCGTTGGCGGC
CAGGGATCGGCCACACCACTCCAGGGCGGCGGCGGTGGCTCCGGCGGCGG
CAGCCGGTCGCGTTCATCCGGCGGCGGAGGTGGTGGCGATCGCAACAAGG
ATCAGACGCCCATCTTCACGCACAGCAACTATGGGAATCCGGCATTCACG
CCACAGAAGGTAACCAAGTCGTCGAGCAGCAAGAACCAGAACGAATCAAG
GCTACCCAAGCCACCAAAGCCGCCGGAGAAGCCCATTTTGCCCTACATGC
GGTATTCGAAACGCGTCTGGGATAGCGTCAAGGCGAAGCATCCAGAGCTG
AAGCTGTGGGAGCTGGGTAAGAAGATCGGTGCCATGTGGAAGTTGCTGCC
CGAGGATGAGAAGACGGAGTTCATTGACGAATACGAGGCGGAGAAGCTGG
AGTACGAGAAATCGCTAAAGGCCTACCACCAGACGCCCGCCTATCAGGCC
TACATGTCGGCCAAGAGCAAGGTGAAGACCGACGTGGATATGCATGAGAC
ACCGTCACGCGGTGGCGGCAGTAAGTCGCAGCATGAGCGACGCATCGACA
TTCAGCCGGCGGAGGACGAGGATGACCAGGACGAAGGGTATACGACCAAG
CACTTGGCCTACGCCCGCTATCTGCACAACCATCGCCTGATTAACGAGAT
ATTCTCGGAGGCCGTTGTACCAGATGTGCGTTCAGTGGTGACCACCACGC
GGATGCAGGTGCTCAAGCGGCAGGTCAGCTCGTTGACGATGCACCAGACC
AAACTTGAGGCGGACTGCAGCAGATGGAGGAGAGTTCGAGGCCAAGAGCA
GCGCATGGTGGAGTCCAGCGAAGCCTTCCAGGAGGAGCTAAAGCGCCACT
GCAGCCGGCGGTCGACGAGAAACCTTTCCAGAAGATGGTGCTTCGCATGT
ACGAAGACTTCAAGCGCGATCGCCCAGCGATTGATGAACCGAATGCAAAT
GCAATAGCGCACGATCCCTGCTGCACTGCCCTTACAACTGCCGCGCTCCA
TAGCAAGAGCAGAG
FMO08234.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dalao-RA | 2668 | CG7055-RA | 115..1164 | 9..1050 | 4855 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9149423..9150420 | 9..1002 | 4620 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:17:16 has no hits.
FMO08234.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:25 Download gff for
FMO08234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dalao-RA | 99..1133 | 9..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:37 Download gff for
FMO08234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dalao-RA | 115..1149 | 9..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:54 Download gff for
FMO08234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dalao-RA | 115..1149 | 9..1036 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:54 Download gff for
FMO08234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9149423..9150457 | 9..1036 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:37 Download gff for
FMO08234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9043456..9044490 | 9..1036 | 98 | | Plus |
