FMO08240.5prime Sequence
993 bp (903 high quality bases) assembled on 2010-03-11
> FMO08240.5prime
CAATCGACATGTCCGCCAAAACTGAGGCGGACAACACGACGGCCGCCAAC
TCCGGCGGCGGAGGAGTCGGGAGCGGCACCTCATCCGGCGGGGGCGCATC
CGCGAATGGAACAGCAACTCCGGCACGTCGTCTGCGTACCCGAAACTCAA
CGGGCAACGGGACTAATAGTGGAAGTGAGTCCGTAAAGAAATCCAATGCT
AACGACGAGCCCTCGACCCCAGTCACCCCGGCAGGAGCAACAGGATCTCA
CACCCATGCTCCGCCAGGCATTTCTCCGGCGGTAATGGAACGGCCTATGC
CCAGTGTTCCCATGAATCACGCCAGCAGCAGTGTGTCAGCCAGCAAAAAG
TACCATAATAGTTGTCCTCATCCCACGCCCACGCCTGCGCCCACTGGGCA
CAAGAAGTCGGTCCACACGCAGCCGCACAGCAGCAACAAGTTTGACCAGG
GAAAGAACGAGGAGTTCCACTTTGACACGCCGCCAGAGTGCCCTGTGTTC
CGGCCCACAACTGAGGAGTTCAAGAATCCACTGGCCTACATCAGCAAGAT
CCGCTCCATAGCTGAGAAGTGTGGAATCGCAAAGATCCTGCCGCCGGCAA
CCTGGTCGCCGCCGTTTGCAGTGGACGTGGACAAGCTACGCTTTGTGCCA
CGTGTCCAGCGGCTGAATGAGCTCGAGGCAAAGACGCGCGTCAAACTCAA
CTTCCTTGATCAGATCGCAAAGTTCTGGGAGCTGCAAGGCTCTTCACTAA
AGATCCCAATGGTGGAGCGAAAGGCTCTCGACTTGTACACACTGCACCGC
ATCGTTCAGGAGGAGGGGGCATGTAGCAACCACAAAGGATCGCAAGTGGG
CCAGGTGGCCAACCGGATGCAGTACCCCTCAAGCAAAGTGTGGCGCACCC
TGAAGGACCTACGAACGCATCTTGACCCCTTTGAAGTATCACCTCGGAAA
GTTCTAGACCAACCCAACGTCTTCTGGATCTGGCAGAACACCG
FMO08240.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lid-RF | 7004 | CG9088-RF | 246..1243 | 9..992 | 4535 | 97.9 | Plus |
| lid-RE | 6941 | CG9088-RE | 246..1243 | 9..992 | 4535 | 97.9 | Plus |
| lid-RD | 5841 | CG9088-RD | 124..1121 | 9..992 | 4535 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5995609..5996490 | 887..9 | 4245 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:04:01 has no hits.
FMO08240.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:40:58 Download gff for
FMO08240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RB | 108..1111 | 2..993 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:48 Download gff for
FMO08240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RC | 128..1131 | 2..993 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:29 Download gff for
FMO08240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lid-RD | 118..1121 | 2..993 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:29 Download gff for
FMO08240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5995491..5996495 | 2..993 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:48 Download gff for
FMO08240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5995491..5996495 | 2..993 | 97 | | Minus |
