FMO08249.5prime Sequence
1046 bp (-84 high quality bases) assembled on 2010-03-11
> FMO08249.5prime
CAGTCGACATGGAAAACCAATATCAGCGCATAGTCTGCGCCACTGCACGC
GAGGATTCGCAGGCAAGGAGGAGCAAGCCCTTGTTTCTGAATGCCTGGTC
GCATACTTCTAGCGTGGACTTCGAGGTGCTTCGCAGCATCTCCGCGCCGG
ACCCGCAAGTGGAGGTCGAGAACAGAGCGCTCCGGGATAAGGTCCGCTAC
TTGGAGGCCAAACTGCAGCAGCACAAGGATCTGCTATCCCAGATTCATGC
CACCTCCGCCAGGATGCAACAGGCATCCTCCCTGCTGGCAGAAAGTAGAC
CACCCACGCCGCCCGCGGTCCAGAGCCACCACATTCTCACGCCACCGAGT
TCAGAGATATGTGCGCCCGCGCAGAATCCCCAGATTCTGGACTACAAGAT
CATCTCGGCACCCGACGATGCGGATGCCATTGAGATTCGCCTGGGGGCGG
AGAGTCTGAACAGCCTGAGCACCTCTGCGGACTCAGATCGCCTGGAGATT
TGCCTGGGCGACGAGAATCATCAGCAGAGCAATCATCACAATTCCCAGCA
GCAGTACAGGATTAGCAGCGGCATAAAGAGGGATGGTTCCTCCGAGTCCG
CCGACACTCCACTACAGTTCATCAAACGCCGCAAGCTGCAGGAGATTCAG
TTGCAGGAAGAAAATCCCGCGGCAGAACATAAAACTACCAGCCAAACCCC
AAGTCAAAGCCCGTAATGGCAGTTTTACCGATCTCAACAAGGGCCAACAG
CAAAACATGGACAACGTGATGGTGTCCATTGCCCGAACAACACCTGTGTG
CCCGCCAGTGTCTTCGAGATATTAACTGGTCGGTGTGCTCGCTGGCCACC
GGAAACTACTGGTCACGATCTTCGACCGGGAAATTCTGGCACCCATTCGA
TGACGGGCAGCCGTCGCCCGCTTTCAAGATCAGGAAAGTCGTTCAGCGAT
GCTCGATCCTGGGAAGATTCAGGACTTCTTATTCGCAGTGACGCCAATGG
TATGCCGTGAGAACGTAGTGTGCTACGTCTTCCCCCCCAGGTGGTC
FMO08249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| insv-RB | 1335 | CG3227-RB | 32..1049 | 7..1013 | 4560 | 97.4 | Plus |
| insv-RA | 1654 | CG3227-RA | 351..1368 | 7..1013 | 4560 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2575588..2576572 | 994..18 | 4250 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:09:50 has no hits.
FMO08249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:10 Download gff for
FMO08249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insv-RA | 354..1377 | 1..1013 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:14 Download gff for
FMO08249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insv-RA | 345..1368 | 1..1013 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:53 Download gff for
FMO08249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| insv-RA | 345..1368 | 1..1013 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:53 Download gff for
FMO08249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2575566..2576572 | 18..1013 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:14 Download gff for
FMO08249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2575566..2576572 | 18..1013 | 97 | | Minus |
