FMO08256.5prime Sequence
749 bp (749 high quality bases) assembled on 2010-03-11
> FMO08256.5prime
CAGTCGACATGTCCAAGAAGGCCAAGACGACAACCGGGGGCAGCAGCAAT
GGCAGCAATGCTACCGCCACATCCACAACCACATCCACATCCAGCAGTAT
TAAGCACAAGCAGCCGGCGGGCAGCAGCAACAACAATGTTGGCCAAAGTC
AGAGCAAGAAGACAAAGCCCAGCGGCAGCTATAATAGCAATAGCAACTAC
TACTACTACGCTGCTGACGAGGAGGAGGGCGGTAGCGCTGACTATGCACT
GAGCAACTACGATAAGAAGGCTGTCAAGGAGCTGTCCCTGCGATTGCTCG
ACGAACTGAGGGCGGCCAAGTCGCGTCATTTGACCTGTACGGAAGTGTCG
CTACCCTGTGATCTCACGCCGAGCGTGGCCCGGGAAATAATCCGCGTGTC
GGAGAAGGAGCCCCGCGGCATACGCGGCTGCACCATCTACATTGAGTTCG
AGGATGAGCCGAAGAATTCGCGTCGCATTGCCTCGATCAAGGTCGATTCG
GATACGGTGTCCACATTCGAAGTGTATCTGACCCTCAGGCAGGATCATCG
CGGCTGGACGTCGCTGTTGCCGCAGTTCATGAAGAGTTTGGCCCGCACGA
TCACCATCAGTCCGGAGTATACGATCACCAAGAATAAGCTATATTCCGCT
GATGGTTTGGGTGCACGCAGGAGCTATAGCTTCGGCAGCCACGCCCATAG
ACCCAGTGCGGCCATCGCCACGCCCACCAACGCAAGCTTTCTAGACCAT
FMO08256.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
scyl-RC | 3124 | CG7590-RC | 702..1424 | 9..731 | 3600 | 99.9 | Plus |
scyl-RA | 2195 | CG7590-RA | 702..1424 | 9..731 | 3600 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11253750..11254472 | 9..731 | 3600 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-28 22:08:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2472 | 39..209 | 207 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2448 | 51..209 | 179 | 61.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6868 | 56..209 | 143 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6845 | 121..206 | 131 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6809 | 121..197 | 126 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2409 | 103..200 | 116 | 59.2 | Plus |
FMO08256.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:41:26 Download gff for
FMO08256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
scyl-RB | 1442..2167 | 9..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:44 Download gff for
FMO08256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
scyl-RA | 702..1427 | 9..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:15 Download gff for
FMO08256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
scyl-RA | 702..1427 | 9..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:15 Download gff for
FMO08256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11253750..11254475 | 9..735 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:44 Download gff for
FMO08256.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11246850..11247575 | 9..735 | 99 | | Plus |