Clone FMO08256 Report

Search the DGRC for FMO08256

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:82
Well:56
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08256.5prime Sequence

749 bp (749 high quality bases) assembled on 2010-03-11

> FMO08256.5prime
CAGTCGACATGTCCAAGAAGGCCAAGACGACAACCGGGGGCAGCAGCAAT
GGCAGCAATGCTACCGCCACATCCACAACCACATCCACATCCAGCAGTAT
TAAGCACAAGCAGCCGGCGGGCAGCAGCAACAACAATGTTGGCCAAAGTC
AGAGCAAGAAGACAAAGCCCAGCGGCAGCTATAATAGCAATAGCAACTAC
TACTACTACGCTGCTGACGAGGAGGAGGGCGGTAGCGCTGACTATGCACT
GAGCAACTACGATAAGAAGGCTGTCAAGGAGCTGTCCCTGCGATTGCTCG
ACGAACTGAGGGCGGCCAAGTCGCGTCATTTGACCTGTACGGAAGTGTCG
CTACCCTGTGATCTCACGCCGAGCGTGGCCCGGGAAATAATCCGCGTGTC
GGAGAAGGAGCCCCGCGGCATACGCGGCTGCACCATCTACATTGAGTTCG
AGGATGAGCCGAAGAATTCGCGTCGCATTGCCTCGATCAAGGTCGATTCG
GATACGGTGTCCACATTCGAAGTGTATCTGACCCTCAGGCAGGATCATCG
CGGCTGGACGTCGCTGTTGCCGCAGTTCATGAAGAGTTTGGCCCGCACGA
TCACCATCAGTCCGGAGTATACGATCACCAAGAATAAGCTATATTCCGCT
GATGGTTTGGGTGCACGCAGGAGCTATAGCTTCGGCAGCCACGCCCATAG
ACCCAGTGCGGCCATCGCCACGCCCACCAACGCAAGCTTTCTAGACCAT

FMO08256.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
scyl-RC 3124 CG7590-RC 702..1424 9..731 3600 99.9 Plus
scyl-RA 2195 CG7590-RA 702..1424 9..731 3600 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11253750..11254472 9..731 3600 99.9 Plus
Blast to na_te.dros performed 2014-11-28 22:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2472 39..209 207 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2448 51..209 179 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6868 56..209 143 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6845 121..206 131 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6809 121..197 126 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2409 103..200 116 59.2 Plus

FMO08256.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:41:26 Download gff for FMO08256.5prime
Subject Subject Range Query Range Percent Splice Strand
scyl-RB 1442..2167 9..735 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:44 Download gff for FMO08256.5prime
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 702..1427 9..735 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:15 Download gff for FMO08256.5prime
Subject Subject Range Query Range Percent Splice Strand
scyl-RA 702..1427 9..735 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:15 Download gff for FMO08256.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11253750..11254475 9..735 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:44 Download gff for FMO08256.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11246850..11247575 9..735 99   Plus