FMO08257.5prime Sequence
1054 bp (933 high quality bases) assembled on 2010-03-11
> FMO08257.5prime
CAGTCGACATGGTGGACTACAGCAAGTGGAAGAACATCGAGATTTCGGAT
GATGAGGACGACACTCACCCGAACATAGACACGCCTTCTCTGTTCCGCTG
GCGGCACCAGGCGCGCGTGGAGCGCATGGCGGAGATGGACCACGAGAAGG
ACGAGCTTAAGAAAAAGCGCCAGAGCTACCAGGCGCGCCTCATGGACGTC
AAGGAGCGGATCTCAAAGAAGGATGGCGACGAGGAGGCCCTGAAGAAAGA
GCTCGAAAAGATCGAGGCCGAGGGCAAAGAGCTGGACCGCATCGAGAGCG
AGATGATTAAGAAGGAAAAGAAAACACCCTGGAACGTGGACACCATCAGC
AAGCCCGGCTTTGAGAAGACCGTAATCAACAAGAAGGCCGGCCGCAAGCC
GGATGAGAATCTGTCCGAGGAAGAGCGAGAGCAGCGCATGAAGCAATTCG
TCAAGGAGAACGAGAAGCTCTGCCAACAGTATGGCATGCTGCGCAAGTAC
GACGATTCGAAGCGGTTTCTGCAGGAGCATCTTCACTTGGTGGGCGAGGA
GACGGCCAACTACCTAGTCATTTGGTCCATCAATCTGGAAATGGAGGAGA
AGCACGAGCTGATGGCCCACGTGGCGCATCAGTGCATTTGCATGCAGTAC
ATTCTAGAGTTGGCCAAACAGCTGGACGTGATCCTCGCGCCTGTGTCAGC
TCCTTCTTCTCAAAGATCCAGCACTGTCATCCCGAGTACCGCGCGCAGTT
CGACAGCGAGATCGAATGTTTCAAAGGACGTATCCAGAAGCGTGCGCAGG
AGAAGATCCAGGAGGCGATAGCCCAGGCCGAGAGGAGGAGCGCAAGGAGC
GCCTCGGACCTGGTGGTCTGGACCCAGCCGATGTCTTTGAATCCCTGCCC
GATGAACTAAAGGCTTGTTTCGAGTCCGCGACGTAAAGCTGCTGCAGAAG
ACATTGCGGCCATGCCGTGAACGTCCCAAGCTGCCATGAAGGGTTGTGTG
GAATCTGTCTCTGGGTGCCAATGCCTGACTTGAAGGTGACAGAAGAGGAA
ATGA
FMO08257.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc37-RA | 1611 | CG12019-RA | 309..1364 | 9..1050 | 4790 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1796176..1796838 | 244..904 | 3170 | 99.2 | Plus |
| 3L | 28110227 | 3L | 1795791..1795996 | 40..245 | 1015 | 99.5 | Plus |
| 3L | 28110227 | 3L | 1796902..1797023 | 904..1019 | 235 | 91 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:08:48 has no hits.
FMO08257.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:41:28 Download gff for
FMO08257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 268..1319 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:46 Download gff for
FMO08257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 302..1353 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:19 Download gff for
FMO08257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc37-RA | 302..1353 | 1..1041 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:19 Download gff for
FMO08257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1795693..1795732 | 1..41 | 92 | -> | Plus |
| 3L | 1795793..1795996 | 42..245 | 99 | -> | Plus |
| 3L | 1796178..1796837 | 246..903 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:46 Download gff for
FMO08257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1795693..1795732 | 1..41 | 92 | -> | Plus |
| arm_3L | 1795793..1795996 | 42..245 | 99 | -> | Plus |
| arm_3L | 1796178..1796837 | 246..903 | 99 | -> | Plus |
